Protein

View in Explore
Genbank accession
QBQ74922.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,66
Protein sequence
MADQGILAQSKPAAATDTVLYRAPVDQSASTVLNIANDGTGSAYSVAVKDYDQRLTLDASTYLLHPGDIISSYSLVFDVNMTASSGFTPGQLITTDDGEKSFRFESFRVPEFTEIFVKIESIRAITVESVSGTFTVGSTVSTGVAPDDTTAVIYGVLDQSTSAILYVGPSTINGSGVEFADGDSLAITGASGTISAGGIAAAADEFVFSITTAGGTYNSFLTETTSLFNDRTYRFDVSDSSMTGSDFALSFTANGIYGPDGAIGGVSPDDGTEYVFGQTVNGTPGSAGAYIQYDFNAGATTNDPVTGVPYFGGSILYFYDNGDAAFGGSDRQFLINSSTEFNEFFIYDLEGSLVASSDTFEVQGVTYTLQTINAGPYGYVRRYSGTTLDVIKGPGSQDFAGTDTIFDNPKDGDATRSLMTVSSVDVASAAVTAENYLTVGATNSANNVDKITSLVVGPGEVVVVNSTTQNNVFSLVGFEDQATSFPTRVFDFS
Physico‐chemical
properties
protein length:493 AA
molecular weight: 51527,56300 Da
isoelectric point:4,05003
aromaticity:0,11156
hydropathy:0,01927

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage S-RIM4
[NCBI] 		2530169 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus
[NCBI] 		1129 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBQ74922.1 [NCBI]
Genbank nucleotide accession
MK493321.1 [NCBI]
CDS location
range 26556 -> 28037
strand +
CDS
ATGGCAGACCAAGGAATTTTAGCACAATCTAAACCAGCAGCAGCAACTGATACTGTATTATACAGAGCACCTGTAGATCAGTCTGCAAGCACGGTGTTGAATATCGCTAACGATGGCACTGGATCGGCATATAGTGTTGCGGTTAAAGATTATGATCAGCGACTGACTCTAGATGCATCGACATATCTTTTGCATCCTGGCGATATTATCTCTTCATACTCTCTTGTTTTTGATGTTAACATGACTGCTAGTTCTGGTTTTACACCAGGGCAGTTAATTACCACCGATGATGGAGAAAAATCTTTCCGATTTGAAAGTTTCCGAGTCCCCGAATTTACAGAAATTTTTGTAAAGATTGAAAGTATTCGTGCAATTACAGTAGAAAGTGTTTCTGGCACATTTACTGTAGGATCTACTGTAAGCACAGGTGTAGCACCAGATGATACTACCGCAGTCATTTATGGCGTGCTTGATCAATCTACAAGTGCAATTCTTTATGTTGGACCATCTACAATCAATGGTAGTGGTGTTGAATTTGCTGATGGTGATTCTCTTGCTATTACTGGTGCTAGTGGCACTATTTCTGCTGGTGGTATTGCCGCAGCAGCAGACGAATTTGTCTTCTCAATAACAACTGCTGGCGGCACATATAATTCATTTTTAACTGAGACAACCTCTCTATTTAATGACAGAACATATCGTTTCGATGTTTCTGATTCTAGTATGACTGGTAGTGATTTTGCTCTATCTTTTACTGCAAATGGTATTTACGGACCTGATGGTGCAATTGGTGGTGTATCTCCTGATGATGGTACTGAATATGTCTTTGGTCAAACTGTAAATGGCACTCCTGGTAGTGCTGGTGCATATATTCAGTATGATTTCAATGCTGGAGCAACAACAAATGATCCTGTCACAGGAGTTCCTTATTTTGGTGGATCTATCCTATACTTCTATGATAATGGTGATGCCGCTTTTGGTGGATCAGATAGACAATTTTTAATCAATAGTAGCACAGAATTTAATGAATTTTTTATCTATGATTTAGAAGGTAGTCTTGTTGCTAGTAGTGATACCTTTGAGGTGCAAGGTGTAACATATACACTTCAAACAATTAATGCTGGTCCATATGGTTATGTCCGTAGATATAGCGGCACTACACTAGATGTTATCAAAGGTCCTGGATCTCAAGATTTTGCGGGCACAGATACTATTTTTGATAACCCTAAAGATGGTGATGCAACTAGAAGTCTCATGACTGTTTCTTCTGTTGACGTTGCTTCTGCTGCAGTAACTGCTGAAAATTATCTGACAGTTGGCGCTACAAATTCTGCTAACAATGTAGATAAAATTACATCTTTAGTTGTTGGTCCTGGTGAGGTAGTTGTTGTAAATAGCACCACTCAAAATAATGTATTCAGTCTAGTTGGTTTTGAAGATCAAGCAACTTCATTCCCAACCAGAGTATTTGACTTCTCGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
bff3abefed2523f5fc61ee8d9af09ae4d2046add9f08ad96c476c083145aabab
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4758
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Diversity in Cyanophage Genomes from Southern New England Coastal Waters Marston,M.F. 2013-04-03 — GenBank