Protein

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Genbank accession
YP_010655372.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MTAYDCTNADAVFRFNGVADGKFTYDNIKSYGHTGAVIRLGNDMHCEGGRVLHDSPSDRKIVIIAGSSAGNTYINERQAFEYTSNFILPTGVELIYLNTTSGVIDVDLSSGTFSDIRNRMVMFVVTGGGVNNVSFTIDGGAGSVNGGVSYIWVTPEIGKSIVAVQKASGNWFVG
Physico‐chemical
properties
protein length:174 AA
molecular weight: 18537,51800 Da
isoelectric point:5,21546
aromaticity:0,10345
hydropathy:0,04655

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010655372.1
1 174
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0053
Central domain 11 163 154 0,3275
C-terminal 164 174 10 0,9966
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-163
C-terminal
164-174

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudoalteromonas phage C7
[NCBI] 		2510494 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudoalteromonas atlantica
[NCBI] 		288 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Alteromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010655372.1 [NCBI]
Genbank nucleotide accession
NC_070824 [NCBI]
CDS location
range 41624 -> 42148
strand -
CDS
ATGACTGCCTATGACTGCACGAACGCTGATGCAGTGTTCAGGTTTAACGGCGTTGCTGACGGGAAGTTTACGTACGATAATATTAAATCATATGGGCACACGGGAGCGGTAATTAGGCTCGGTAACGACATGCACTGTGAAGGTGGTAGAGTACTTCATGATTCACCTTCCGACAGGAAAATAGTGATAATAGCTGGTTCAAGTGCAGGAAATACATACATAAACGAGAGGCAAGCTTTCGAATACACATCTAACTTTATCTTGCCTACTGGAGTTGAATTAATATACTTAAATACAACAAGCGGGGTCATAGATGTAGACCTATCTTCAGGAACGTTCTCTGATATACGCAACCGAATGGTTATGTTTGTAGTTACTGGAGGGGGTGTTAATAATGTATCTTTCACAATAGACGGAGGAGCTGGCAGTGTGAACGGCGGAGTTTCGTACATATGGGTAACCCCTGAAATTGGCAAAAGTATTGTCGCAGTGCAAAAAGCCTCTGGCAATTGGTTTGTTGGCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
508d28ccf747129bd30d92e3aa11d1594e651e3f4eb9210b426b172e821837d0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7206
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and Genetic Analysis of a Novel Pseudoalteromonas Phage C7 from the yellow sea coast, China Wang,Q. 2019-11-23 — GenBank