Protein

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Genbank accession
YP_009268699.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,97
Protein sequence
MYKIKDVETRIKNDGVDLGDIGCRFYTEDENTASIRIGINDKQGRIDLKAHGLTPRLHLFMEDGSIFKNEPLIIDDVVKGFITYKIPKKVIKHAGYVRCKLFLEKEEEKIHVANFSFNIVDSGIESAVAKEIDVKLVDDAITRILKDNATDLLSKDFKDKIDKDVISYIEKNESRFKGAKGDKGEPGQPGAKGDTGKKGEQGTPGKNGTVVSINPDTKMWRIDGKDTDIKAEPELLDKINIANVEGLENKLQEVEKIKDTTLNNSKTYTDSKIAELVDSAPESMNTLRELAEAIQNNSISESVLQQIGSKVSTEDFERFKQSLNSLYADKNHSHTIKQIEGLENALSKKSDINHSHDERYLLSSNAFTKEKADKLYQPIGSSQPSLNVWTGSETEYNYLYQKDPNTLYLIKG
Physico‐chemical
properties
protein length:412 AA
molecular weight: 46210,44790 Da
isoelectric point:5,58627
aromaticity:0,06553
hydropathy:-0,68835

Domains

Domains [InterPro]
DC_0885
STR
1–367
DC_0885 IPR056923
IPR018913
ATT
4–141
IPR018913 G3DSA:1.20.5.320 Coil PF12789
G3DSA:2.60.40.3350
ATT
14–125
G3DSA:2.60.40.3350
YP_009268699.1
1 412
Architecture
ATT
STR
RBD
ATT 1-141 | STR 142-367 | RBD 386-410 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage 80
[NCBI] 		2913981 Uroviricota > Caudoviricetes > Azeredovirinae > Phietavirus pv80 >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009268699.1 [NCBI]
Genbank nucleotide accession
NC_030652.1 [NCBI]
CDS location
range 36729 -> 37967
strand +
CDS
ATGTACAAAATAAAAGATGTTGAAACGAGAATAAAAAATGATGGTGTTGACTTAGGTGACATTGGCTGTCGATTTTACACTGAAGATGAAAATACAGCATCTATAAGAATAGGTATCAATGACAAACAAGGTCGTATCGATCTAAAAGCACATGGCTTAACACCTAGATTACATTTGTTTATGGAAGATGGCTCTATATTCAAAAATGAGCCCCTTATTATCGACGATGTTGTAAAAGGGTTCATTACCTACAAGATACCTAAAAAGGTTATCAAACACGCTGGTTATGTACGTTGTAAGCTGTTTTTAGAGAAAGAAGAAGAAAAAATACATGTCGCGAACTTTTCTTTCAATATCGTTGATAGTGGCATTGAATCTGCTGTAGCAAAAGAAATCGATGTTAAATTGGTAGATGATGCTATTACGAGAATCTTAAAAGATAACGCGACAGATTTATTGAGCAAAGACTTTAAAGATAAAATAGATAAAGATGTTATTTCTTACATCGAAAAGAATGAAAGTAGATTTAAAGGTGCGAAAGGTGATAAAGGCGAACCGGGACAACCTGGTGCGAAAGGTGATACAGGTAAAAAGGGAGAACAAGGCACACCCGGTAAAAACGGTACTGTAGTATCAATCAATCCTGACACTAAAATGTGGCGAATTGATGGTAAAGATACAGATATCAAAGCAGAACCTGAGTTATTGGACAAAATCAATATCGCAAATGTTGAAGGGTTAGAAAATAAATTGCAAGAAGTTGAAAAAATCAAAGATACAACTCTCAACAACTCTAAAACGTATACGGATTCAAAAATTGCTGAACTAGTTGATAGCGCGCCTGAATCTATGAATACATTAAGAGAATTAGCAGAAGCAATACAAAACAACTCTATTTCAGAAAGCGTATTGCAACAGATTGGCTCAAAAGTTAGTACAGAAGATTTTGAGAGATTCAAGCAATCATTAAACAGTTTGTATGCAGATAAAAATCATAGTCATACAATCAAACAGATTGAAGGATTAGAAAATGCTTTATCAAAAAAATCAGACATAAATCACAGTCATGATGAACGTTATCTTTTATCATCAAATGCTTTTACAAAAGAGAAAGCAGATAAACTTTATCAACCTATCGGTTCTTCGCAGCCATCACTGAATGTTTGGACAGGCAGTGAAACAGAATATAATTATTTGTACCAAAAAGACCCTAATACACTTTACTTAATTAAGGGGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
222d257c529cc9e21fce8d9da485cfced5035bf07015eefbc2fea7fe93bc2d31
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8088
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete nucleotide sequence of Staphylococcus aureus bacteriophage 80 Christie,G.E., King,D., Olivarez,N. and Tallent,S.M. 2010-11 — GenBank