Protein

View in Explore
Genbank accession
QXV85442.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,61
Protein sequence
MPPAIIGAAIALGASAAAAAGWIATGVALAIGMAATAAGALLTKTPNMNFNAYKGQQERKQVLRAAAASRTVVYGTTVASGVMTFAEEQPGDQDEDELLHMALVVASHPLEGIGDIWLGDDLVQTFEQYVTWEFHNDRQTVDPFMLSNCPSWKEDMIGKGIAWLRISFKFNAEKFPSGLPNIKLLKRGRRVYDPRSGYTIFSDNAALVILDYFRTYLKRKDEDINWDQFKEAANICDEYVNNADGSTERRYKINGEFEVDEAPSKILDAMLQACGGELTYVAGKHGLLVGAYYGPATMTLDESCIAGDIKIVPETSYKERTNTITGTFIDPKQNYVEADFPPVVVKEWVEKDGGEITQDMDFRFVTSEYQAQRLSNIILRRKRVGRTIEIPCNMKGYKFRPGMYVKVTITQIGMKNVEMRVTKWSFNPKGGVNLTLRQDFLEMWDDAIGKPMDRPDLVDLPSGGVAQPQNLQYQILQISDVVQGVLSWTNMGQVAYNRVAVRQGGVTIWTAQVPGQSVRVTGLLRGSYTAHVQAVSHSGAISPEAYLEFNIQAPPPPSSVEIQNGYFSLTLIPKIAELTSVSTQFDFWTSGETKLPSANTDVVERDATREGMGTIWQKNNLLNDHTYYWYVRTINAFGSSSFVEVEARVWAETAQIIEIMDKEFQETETFKNLMETVQKVDDGVTELSKVVEGQATKIESVQSSVGDVVVTVQEQSQALADLNGKLSAQWGQKVQIDNNGNKYVAGMQLGIEGSGGQFQSYFMVSADNFAIYNPVAGAAQLAFAIKNGQSFLREAFIENGSITNAKIGNVIQSNNWNGNDQGWAITKDGYCVFNNVTVRGTVVANAGQFGFNGNGGITIDSNGIRVPLSGGGVVIVGRW
Physico‐chemical
properties
protein length:879 AA
molecular weight: 96584,94800 Da
isoelectric point:5,07751
aromaticity:0,09556
hydropathy:-0,21115

Domains

Domains [InterPro]
DC_0754
STR
1–878
DC_0754
IPR032876
ATT
314–424
IPR032876 IPR057587 IPR053171
IPR015406
RBD
712–848
IPR015406
QXV85442.1
1 879
Architecture
STR
ATT
STR
ATT
STR
STR 1-313 | ATT 314-424 | STR 425-555 | ATT 556-661 | STR 662-878 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage VogelGryff
[NCBI] 		2851989 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli K-12
[NCBI] 		83333 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QXV85442.1 [NCBI]
Genbank nucleotide accession
MZ501110.1 [NCBI]
CDS location
range 15154 -> 17793
strand +
CDS
ATGCCACCAGCAATAATTGGAGCAGCAATAGCTTTAGGTGCTTCCGCTGCCGCTGCGGCGGGGTGGATTGCTACGGGTGTAGCTTTAGCTATTGGTATGGCTGCAACTGCGGCGGGTGCTCTTTTAACTAAGACACCTAATATGAACTTTAATGCTTATAAAGGTCAACAAGAGCGTAAACAGGTTTTACGAGCAGCCGCAGCGTCTCGAACAGTAGTGTATGGCACAACGGTCGCTTCCGGAGTTATGACGTTTGCTGAGGAGCAGCCTGGAGATCAGGACGAAGACGAACTCCTGCATATGGCTCTTGTTGTAGCTTCACATCCATTGGAGGGAATTGGTGATATTTGGCTTGGGGATGACCTTGTACAGACTTTCGAACAGTATGTTACTTGGGAATTCCATAACGACCGTCAGACTGTAGATCCATTTATGTTAAGCAATTGCCCTTCCTGGAAAGAGGATATGATCGGGAAAGGGATTGCATGGCTTCGTATTAGCTTTAAATTTAATGCGGAAAAATTCCCGTCTGGTTTGCCAAATATTAAGCTTCTTAAAAGAGGTCGCCGTGTATATGATCCTCGTTCTGGTTATACCATATTTAGCGATAATGCAGCGTTAGTGATACTTGATTACTTCCGCACGTATTTAAAGCGCAAAGATGAAGATATTAACTGGGACCAATTCAAAGAAGCGGCTAACATCTGTGATGAATACGTCAATAACGCTGATGGTTCTACAGAGCGCCGTTATAAAATCAACGGTGAATTTGAAGTAGATGAAGCCCCATCCAAAATTCTGGATGCTATGTTGCAAGCTTGTGGTGGTGAGCTAACGTATGTAGCGGGTAAACACGGTCTTCTGGTTGGCGCATATTACGGCCCAGCAACAATGACGCTGGACGAAAGTTGTATTGCTGGGGATATTAAAATTGTTCCAGAGACTTCTTATAAGGAGCGCACCAACACCATCACAGGGACATTTATTGATCCAAAGCAAAACTATGTTGAAGCGGACTTTCCTCCAGTTGTGGTTAAGGAATGGGTGGAAAAGGACGGCGGTGAAATAACGCAAGACATGGATTTCCGATTTGTAACAAGTGAATATCAAGCCCAACGTTTGTCTAATATTATTCTACGTCGTAAACGTGTTGGCCGTACAATTGAAATTCCTTGTAACATGAAGGGTTATAAATTTCGTCCAGGAATGTATGTAAAAGTCACCATTACGCAGATTGGCATGAAGAATGTTGAAATGCGCGTTACTAAATGGTCTTTTAACCCTAAAGGTGGTGTTAACCTTACACTACGTCAAGATTTCCTGGAAATGTGGGACGATGCAATTGGTAAGCCTATGGACAGACCAGATCTTGTAGACTTGCCAAGTGGTGGTGTTGCCCAACCTCAAAATCTTCAATACCAGATATTGCAGATTAGTGATGTGGTACAGGGGGTATTATCCTGGACCAACATGGGGCAAGTTGCATATAACCGCGTAGCTGTGCGACAGGGAGGTGTCACTATTTGGACAGCACAAGTCCCCGGCCAAAGCGTTCGTGTCACTGGGTTGCTGCGTGGGTCGTATACTGCGCACGTTCAAGCTGTATCGCACAGTGGCGCAATATCACCGGAAGCTTATCTGGAGTTTAATATTCAAGCCCCACCGCCGCCTTCATCTGTCGAAATACAGAACGGTTATTTTTCTTTAACTCTTATACCAAAGATTGCAGAGCTCACTAGTGTTAGCACACAATTTGATTTCTGGACGTCTGGTGAAACAAAACTGCCGTCTGCTAATACAGATGTTGTTGAGCGCGATGCCACCCGTGAAGGTATGGGAACTATATGGCAGAAAAATAACTTACTCAATGACCACACTTATTACTGGTATGTAAGAACTATCAATGCCTTTGGGTCGTCCTCGTTTGTGGAAGTTGAAGCTCGTGTATGGGCAGAAACTGCACAGATCATAGAAATTATGGATAAAGAGTTTCAAGAAACTGAAACTTTCAAAAACCTCATGGAGACTGTGCAAAAGGTTGATGACGGTGTAACGGAATTGTCCAAAGTAGTTGAAGGACAAGCTACAAAAATTGAATCGGTTCAGAGTAGTGTGGGTGATGTTGTTGTTACCGTGCAAGAGCAATCGCAAGCACTAGCAGATCTTAATGGTAAACTTTCTGCTCAATGGGGACAAAAGGTTCAAATAGACAATAATGGTAACAAATATGTTGCAGGTATGCAGTTAGGTATTGAAGGTAGCGGAGGACAATTCCAGTCTTACTTTATGGTGAGCGCGGATAACTTTGCTATTTATAATCCTGTAGCAGGAGCAGCACAGCTTGCATTCGCTATTAAAAACGGTCAAAGTTTCTTGCGAGAAGCGTTTATTGAAAACGGATCGATTACTAACGCTAAGATTGGTAATGTTATCCAGTCCAATAACTGGAATGGTAACGATCAAGGTTGGGCAATTACAAAAGACGGTTATTGCGTATTTAATAACGTGACCGTCAGAGGGACCGTTGTTGCTAACGCTGGTCAATTTGGTTTCAATGGAAATGGAGGTATTACAATTGATAGTAACGGTATTCGTGTTCCGCTATCAGGTGGTGGTGTTGTCATAGTGGGACGATGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1c216f83c790dae535bf9493dd8fd65dbaae2a5a48a899a7cd0236e433a69913
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3003
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Systematic exploration of Escherichia coli phage-host interactions with the BASEL phage collection Maffei,E., Shaidullina,A., Burkolter,M., Heyer,Y., Estermann,F., Druelle,V., Sauer,P., Willi,L., Michaelis,S., Hilbi,H., Thaler,D.S. and Harms,A. 2021 — GenBank