Protein

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Genbank accession
YP_009624339.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MAWYRTGTIAIANGSTTVTGTNTNFTDTATGPNPGDMLIVGVGANLRIYEIQAINNATQLTLATAATLAVAAGSAYQIQTSMATSNSGLAKKISATMDRMLNSVQNWMNILTGAGDVTIIDYEGKSATGKAWPTMSGLVTGALQKDSNLNDVANKQTARSNISASSVRLLTEGSGNDWYANFTSSIDMGIKSHSNTQNTVSPWDAPAQYTLVNYFPTTTVNIGTALASSWGSDNEYYLNSKNSAVSGYQGWKGWSRLWHSRNTSVDSNGFIKKASPIVKLFRDGTSEKNGEASEVSSTKISTGVYRVTGVRGFNSDAAWGGPDGGIVIPKDKNDMPLLWVDYEVEESGDIIIKTYHRENGSAPKFAQNKIDGCKDGDPIDIPEYRWVDMRVEVYMEEQPEPQEQQQEETEE
Physico‐chemical
properties
protein length:411 AA
molecular weight: 44491,68690 Da
isoelectric point:4,87868
aromaticity:0,08273
hydropathy:-0,46204

Domains

Domains [InterPro]
DC_0709
STR
1–411
DC_0709
IPR058008
RBD
262–393
IPR058008
YP_009624339.1
1 411
Architecture
STR
STR 1-411
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pantoea phage vB_PagS_Vid5
[NCBI] 		2099652 Uroviricota > Caudoviricetes > Vidquintavirus >
Host Pantoea agglomerans
[NCBI] 		549 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009624339.1 [NCBI]
Genbank nucleotide accession
NC_042120 [NCBI]
CDS location
range 22230 -> 23465
strand +
CDS
ATGGCCTGGTACAGAACAGGAACGATAGCAATCGCAAACGGGTCAACTACCGTTACGGGCACCAACACTAATTTCACGGATACTGCTACAGGACCTAACCCTGGCGATATGCTTATTGTCGGTGTCGGTGCAAACCTTCGAATCTACGAGATCCAAGCTATCAACAACGCGACACAGCTTACTTTAGCCACAGCGGCCACTTTAGCGGTTGCAGCGGGGTCCGCGTACCAAATCCAGACCAGCATGGCCACAAGTAACAGTGGGCTCGCTAAGAAAATTAGCGCAACGATGGATCGTATGCTCAACAGTGTGCAGAACTGGATGAACATTCTTACGGGTGCCGGAGATGTGACGATTATCGACTATGAGGGTAAAAGCGCAACCGGTAAAGCTTGGCCTACCATGAGCGGTCTCGTAACTGGTGCATTACAAAAGGACAGCAACCTTAACGATGTCGCTAATAAACAAACCGCTAGAAGTAATATATCGGCATCCTCTGTCAGACTTTTAACGGAGGGTAGCGGAAACGATTGGTACGCTAACTTTACATCATCCATAGATATGGGTATTAAAAGCCATTCAAATACCCAAAATACAGTCAGCCCGTGGGACGCTCCGGCGCAGTATACACTCGTAAACTATTTTCCGACAACCACAGTGAACATAGGTACTGCCCTTGCTAGTAGCTGGGGGTCAGATAACGAATATTACCTGAACTCTAAGAATTCTGCGGTGTCAGGATATCAGGGGTGGAAGGGCTGGTCTAGGTTGTGGCACAGCCGTAACACTTCTGTGGACAGCAACGGATTCATTAAAAAGGCTTCCCCGATAGTCAAGCTTTTTCGAGATGGTACTAGCGAGAAAAACGGAGAGGCTTCGGAGGTGTCGTCCACCAAGATTTCCACAGGGGTCTATAGGGTCACCGGGGTAAGAGGTTTCAATTCCGATGCAGCTTGGGGAGGCCCTGACGGTGGTATAGTTATTCCAAAAGATAAAAACGACATGCCCTTGCTGTGGGTCGATTATGAGGTCGAGGAAAGTGGAGACATAATTATCAAGACATACCACAGGGAAAATGGATCCGCTCCTAAGTTTGCGCAAAACAAGATTGACGGTTGTAAAGACGGAGACCCGATTGACATTCCAGAATATCGCTGGGTGGATATGCGTGTCGAAGTATATATGGAAGAACAACCTGAGCCTCAAGAACAGCAGCAAGAGGAAACTGAGGAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
a662c42edd6518109be92f14ec1ac3b1180fecf2736d9ec60eb6463757483793
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8127
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Pantoea phage vB_PagS_Vid5 Truncaite,L., Simoliunas,E. and Meskys,R. 2011-08-10 — GenBank