Protein

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Genbank accession
QIG64836.1 [GenBank]
Protein name
tail fiber protein host specificity
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,82
Protein sequence
MARLGQFRGDTLENWKKENAIIPDREFILIASDASKPTTYDFWACGDGITHFEDLQMNGNGGGSGGAMTVLQSLGDNTEFPMSQEAVTRYISEYIVSNYHTNPATGKNIFTALEAINLVPIYIRRLGLKCGFLTLVDPTQEITRLVMIQYIGKSLSESDWTNLNNWSSLDIQAESTLTVFIFKISPTEPATPVGGYWNTEANIVVYPEGWTGTDFSSEGDIVWMSVGIFGADGNLKGEWSKPIRVTGEDGTDGTDGSSIEFIYKLTKTDKVVPSTPDNRPNESQYVPDGWTNHPTGISLEMQVEWVCTRTKQENGVWNGWTTPVMWSKYGVNGKDGDGVEYIYKLNNTGVAPDRPTEVSQEPEFVPNGWTDNPSGISASNKYEWVCIRKFRDGLWGEFSNPALWAKYGDNGQTGNSARTMYCKTADASTVPEVNASNINPGSIWGVTIPSYSGTEVVWGIQAIVAYDNTLVQEWQGPYLITGINGKDGTPPNYKTYVFKLSDSKPSAPTSNDPTSPGGGWVDYPNQEGNWWQCVGSVNGVTGLVTEWGEVIPLNGRDGTAQDGKFTEFRFAKTSSDSAPSVVKSDRNPSGWTVNFPTLSDTEILWMIQAVINSDNTLYSNWEGPVRISGERGPIGETGPAGKDGVNGSQGVAGIPGVDIELRFSLGTDTTYDATWNNIVKTTRNPTSFGWSLQMPEPTDSKLYIWLIQARIAHQVNGDEGTLETGSWSEPIRLNGVNGLPGPQGKKGQVVYPAGVYGNTVSYTTTETKAPYVYDPSDGNFYVLNAIMTWLGTEQNNRTPSQDYATNGGKYWLKFEAFEAVYAKIGIIANGLIGSAVFNGDYMFSQQGIDANGIVTTSYENFGTENFTPNYQVNFATGDVIMNKGIVNSQILYNYQFLDLSINDGDLFTKAGENNYIIVSKAKHGNLAEFNISKIYVGIPADPTIANTNINKYYGKLKIVNITGDVIKVYLNEESYTNHFYYSYIQQQQGSTLKEDAKDADLYILNKTETIYLTPGGNLEVSIFSIKDGTLVGEPSFMYMIDNIGDFQRAVIYNNTSNALQNRYKNIEE
Physico‐chemical
properties
protein length:1068 AA
molecular weight: 117613,14260 Da
isoelectric point:4,60694
aromaticity:0,11517
hydropathy:-0,41283

Domains

Domains [InterPro]
DC_0392
STR
26–259
DC_0392 DC_0392 DC_0392
DC_0392
STR
247–333
DC_0392 DC_0392 DC_0392
QIG64836.1
1 1068
Architecture
STR
STR 26-1063 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIG64836.1
1 1068
Domain Start End Length (AA) Confidence
N-terminal 1 896 896 0,9827
Central domain 897 1057 162 0,7216
C-terminal 1058 1068 10 0,3322
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-896
Central
897-1057
C-terminal
1058-1068

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacteroides phage SJC03
[NCBI] 		2710505 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Bacteroides thetaiotaomicron
[NCBI] 		818 cellular organisms > Bacteria > Pseudomonadati > FCB group > Bacteroidota/Chlorobiota group > Bacteroidota

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG64836.1 [NCBI]
Genbank nucleotide accession
MT074146.1 [NCBI]
CDS location
range 68608 -> 71814
strand +
CDS
ATGGCTCGTTTAGGACAGTTTAGAGGAGATACATTAGAAAATTGGAAGAAAGAAAATGCTATAATTCCAGATAGGGAATTTATACTTATAGCATCAGATGCTAGTAAGCCTACTACGTATGATTTTTGGGCTTGTGGAGATGGTATTACTCATTTTGAAGATCTACAAATGAATGGTAATGGTGGAGGAAGTGGAGGAGCAATGACTGTTCTTCAAAGTTTAGGTGATAATACTGAATTTCCAATGAGTCAAGAAGCAGTAACAAGATATATATCTGAGTATATTGTATCTAATTATCATACTAATCCTGCTACTGGTAAAAATATTTTTACTGCTTTAGAAGCTATTAATTTAGTTCCAATTTATATTAGAAGATTGGGTTTAAAATGTGGATTTTTAACTTTAGTAGACCCAACTCAAGAAATTACAAGATTAGTTATGATTCAGTATATAGGAAAATCTTTATCTGAATCAGATTGGACTAATTTAAATAATTGGAGTTCTCTTGATATTCAAGCAGAAAGTACTTTAACTGTTTTTATTTTTAAAATAAGTCCAACAGAACCAGCAACTCCTGTAGGTGGTTATTGGAATACAGAAGCTAATATAGTTGTTTATCCAGAGGGATGGACAGGAACAGATTTTTCTTCTGAAGGAGATATAGTTTGGATGTCTGTTGGTATATTTGGAGCAGATGGAAATTTAAAGGGAGAATGGTCTAAACCTATAAGAGTTACAGGAGAAGATGGTACAGATGGTACAGATGGTTCCTCTATTGAATTTATTTATAAATTAACAAAAACAGATAAAGTTGTACCTAGTACTCCAGATAATAGACCTAATGAATCTCAATATGTTCCAGATGGTTGGACTAATCATCCAACAGGAATTAGCTTAGAGATGCAAGTTGAATGGGTTTGTACAAGAACAAAACAAGAAAATGGTGTTTGGAATGGTTGGACAACTCCTGTAATGTGGAGTAAATATGGTGTAAATGGTAAAGATGGTGATGGTGTTGAATATATTTATAAATTAAATAATACAGGTGTTGCTCCAGATAGACCTACAGAAGTATCTCAAGAACCTGAATTTGTTCCAAATGGTTGGACTGATAATCCTTCTGGCATTTCTGCATCAAATAAATATGAATGGGTTTGTATTCGTAAATTTAGAGATGGTCTTTGGGGAGAATTTAGCAATCCTGCTTTATGGGCTAAATATGGAGATAATGGACAAACAGGTAATAGTGCTAGAACAATGTATTGCAAAACTGCAGATGCTAGTACTGTTCCAGAAGTAAATGCTAGTAATATAAATCCAGGTAGTATTTGGGGGGTTACTATTCCTAGTTATTCTGGTACTGAAGTTGTTTGGGGTATTCAAGCAATTGTTGCTTATGATAATACCTTAGTCCAAGAATGGCAAGGTCCTTATTTAATTACAGGTATTAATGGAAAAGATGGAACTCCTCCTAATTATAAAACTTATGTATTTAAATTAAGTGATTCTAAACCTAGTGCTCCTACTAGTAATGACCCAACTTCTCCAGGTGGAGGTTGGGTAGATTATCCTAATCAAGAAGGTAATTGGTGGCAATGTGTAGGTAGTGTAAATGGTGTTACAGGATTAGTTACAGAATGGGGTGAAGTTATTCCTTTAAATGGTAGAGATGGTACTGCTCAAGATGGTAAATTTACAGAATTTCGTTTTGCAAAAACTTCATCAGATTCAGCTCCAAGTGTTGTAAAATCAGATAGAAATCCTTCTGGTTGGACTGTAAATTTTCCTACTCTTTCTGATACAGAAATTTTATGGATGATTCAAGCTGTTATTAATTCAGATAATACTTTATATTCAAATTGGGAAGGACCTGTTAGAATAAGTGGAGAAAGAGGTCCCATAGGAGAAACTGGTCCTGCTGGCAAAGATGGTGTTAATGGAAGTCAAGGTGTTGCAGGTATTCCAGGAGTAGATATAGAACTAAGATTTAGTTTAGGTACTGATACTACTTATGATGCTACTTGGAATAATATTGTTAAAACAACAAGAAATCCTACTTCCTTTGGTTGGTCTTTACAAATGCCTGAACCAACAGATTCTAAACTTTATATTTGGTTAATTCAAGCTAGAATTGCACATCAAGTAAATGGAGATGAAGGTACTTTAGAAACTGGTTCATGGTCTGAACCAATTAGATTAAATGGTGTAAATGGATTACCAGGTCCTCAAGGTAAAAAAGGACAAGTTGTATATCCTGCTGGAGTTTATGGAAATACAGTTAGTTATACAACAACAGAAACAAAAGCTCCTTATGTATATGACCCAAGTGATGGTAATTTCTATGTACTTAATGCTATAATGACATGGTTAGGTACAGAACAAAATAATAGAACTCCTTCACAGGATTATGCTACTAATGGTGGTAAATATTGGTTGAAATTTGAAGCTTTTGAAGCAGTTTATGCTAAAATTGGTATTATTGCTAATGGTTTGATTGGTTCTGCTGTATTTAATGGTGACTATATGTTTAGTCAACAAGGAATTGATGCTAATGGTATAGTTACTACTTCTTATGAGAACTTTGGTACTGAGAATTTTACTCCTAATTATCAAGTTAATTTTGCTACTGGCGATGTTATTATGAATAAAGGAATTGTGAATAGTCAGATACTTTATAACTATCAGTTCTTAGATCTTAGTATAAATGATGGTGATTTGTTTACTAAAGCAGGAGAAAATAATTATATTATTGTATCTAAAGCAAAGCATGGTAACTTAGCGGAATTTAATATATCTAAAATATATGTTGGTATTCCTGCTGACCCTACTATTGCAAATACTAATATTAATAAGTATTATGGTAAACTTAAGATAGTAAATATAACAGGAGACGTTATTAAGGTTTATTTAAACGAAGAATCTTATACTAACCATTTCTATTATAGTTATATTCAACAGCAACAAGGAAGTACTTTAAAAGAAGATGCTAAAGATGCTGATTTGTATATATTGAATAAAACTGAGACTATATATTTAACTCCCGGTGGAAATCTTGAAGTATCTATATTTTCAATTAAAGATGGAACCCTTGTTGGAGAACCTTCATTTATGTATATGATTGATAATATTGGAGACTTCCAAAGAGCTGTTATATATAATAATACTAGTAATGCTTTACAAAACAGATACAAAAATATAGAAGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c7a072e887dce351a9584a8e7f51847cc1a9035c31702234859c2d03c8649bf4
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2676
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteroides thetaiotaomicron-infecting bacteriophage isolates inform sequence-based host range predictions Hryckowian,A.J., Merrill,B.D., Porter,N.T., Van Treuren,W., Nelson,E.J., Garlena,R.A., Russell,D.A., Martens,E.C. and Sonnenburg,J.L. 2020 — GenBank