Protein

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Genbank accession
YP_012787276.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,86
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MSRNLMPKSGAMAPYVVVNRDAAVAGVFSVDGEVGAVVLTSKYLQISKYTTDKAATDAAINNINESIGNINTALGGVNTTLDTKAAKGANNDITELNALTKAIKISQGGTGAVTLENARANLQVERLRQQDNGTFITSPDGKYSLFIYNSGDFGLINSASTAVSAMKVAFGGTGGTTPKTARKGLNVPVGALAETVPDGDNVLNYVAVAGQSGYYSSGDAIVNGPPKQEGWWTYNFHCHGVDINGVAQYGILRAVGLSGSSWVNVLDGTDNWRGWQEQFNVQTTVQISNGGTGATNISQARSNFGIGETDIPVFRGVNLIEKNGANSGILYLINKNAEGVQLSYSRIYNEIQGATAKATIQVTREGGDYNYYQFDEHGNALNYNSITVGRGIGNALGDNSLVIGDTDTGFKWGGDGIIQIHCNGSNIASYEVHNMHINGLLTIWPTENNANGVRVSGARTGGGNALIGGQIAGGGWDGWRDRASGLLVELPGDDAASNIFKAVRWGGDWAAGLDVVRYGAGGCEAHLNIRGATYTFNDAGYASAVQWVNTSDIRLKANLKEIESAKEKVKSIKGYTYFKRNNLDEDEHSIYSEEAGVIAQDVQAVLPEAVYKISNSEYLGVSYSGITALLVNAFNELNEVVEKQQQEIDELKKLVKQLLGK
Physico‐chemical
properties
protein length:661 AA
molecular weight: 70264,18810 Da
isoelectric point:5,25905
aromaticity:0,08169
hydropathy:-0,24644

Domains

Domains [InterPro]
DC_1346
ATT
1–166
DC_1346 DC_1202
DC_0076
STR
123–285
DC_0076 IPR030392 Coil
YP_012787276.1
1 661
Architecture
ATT
STR
ATT 1-166 | STR 167-661
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_012787276.1
1 661
Domain Start End Length (AA) Confidence
N-terminal 1 416 416 0,4364
Central domain 417 615 200 0,2228
C-terminal 616 661 45 0,9944
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-416
Central
417-615
C-terminal
616-661

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_SenS_UTK0010
[NCBI] 		3028909 Uroviricota > Caudoviricetes > Demerecviridae > Epseptimavirus > Epseptimavirus UTK0010
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_012787276.1 [NCBI]
Genbank nucleotide accession
NC_111488.1 [NCBI]
CDS location
range 83970 -> 85955
strand -
CDS
ATGTCACGTAATTTAATGCCAAAAAGTGGGGCTATGGCCCCCTATGTTGTAGTTAATAGAGACGCCGCAGTTGCCGGCGTTTTCTCTGTTGATGGAGAAGTTGGTGCTGTTGTGCTAACTTCCAAATACCTGCAAATCTCTAAGTATACTACTGATAAAGCTGCTACTGATGCAGCTATCAATAATATTAACGAGTCGATTGGTAATATTAATACTGCATTAGGGGGTGTTAATACTACTTTAGATACTAAAGCTGCTAAAGGTGCCAATAACGATATTACAGAATTAAATGCACTTACTAAAGCTATTAAAATTTCTCAAGGTGGTACTGGGGCAGTAACGCTAGAAAATGCTAGAGCAAATCTACAAGTAGAACGCCTACGTCAGCAAGATAACGGAACTTTTATTACCTCTCCTGACGGTAAATATTCTTTATTTATCTATAATAGTGGAGATTTTGGTTTAATTAATAGTGCTAGTACAGCAGTTAGTGCTATGAAAGTTGCTTTCGGTGGTACGGGTGGAACTACTCCTAAAACTGCAAGAAAAGGCCTTAATGTCCCTGTTGGTGCCTTGGCTGAGACAGTACCTGATGGAGATAACGTATTGAACTATGTAGCTGTTGCTGGCCAGAGTGGGTATTATTCCTCTGGTGACGCAATAGTTAACGGGCCTCCTAAGCAAGAGGGTTGGTGGACGTATAACTTCCACTGTCATGGAGTAGACATAAATGGTGTGGCACAATATGGTATACTTCGTGCAGTTGGATTGTCTGGTAGTTCCTGGGTTAACGTTCTTGATGGTACTGATAACTGGAGAGGATGGCAGGAACAATTTAATGTTCAAACTACTGTTCAAATCTCTAATGGGGGTACAGGTGCAACAAACATAAGCCAAGCAAGAAGTAATTTTGGAATTGGTGAAACTGATATTCCTGTTTTTAGGGGTGTGAATCTTATTGAAAAGAATGGTGCTAATTCCGGCATTCTTTACCTAATAAACAAGAACGCAGAAGGTGTGCAACTTTCATATTCCAGGATCTACAATGAAATTCAAGGAGCGACCGCTAAAGCAACAATACAAGTAACAAGAGAAGGTGGTGATTATAACTATTATCAATTTGACGAGCATGGTAATGCACTAAACTATAACTCTATAACAGTAGGTCGTGGTATTGGTAACGCTCTTGGTGATAATTCATTGGTTATTGGTGATACTGACACTGGCTTTAAATGGGGTGGTGATGGTATTATTCAAATTCATTGCAATGGTAGTAATATTGCATCTTATGAAGTGCACAATATGCATATTAATGGATTACTTACAATATGGCCTACTGAGAATAACGCAAATGGGGTTAGAGTTTCAGGCGCTAGAACTGGTGGCGGTAATGCGTTAATTGGGGGTCAAATTGCTGGCGGCGGCTGGGATGGTTGGCGAGATCGCGCATCTGGTCTACTTGTTGAACTACCAGGTGATGATGCCGCATCAAACATATTCAAGGCTGTTAGGTGGGGCGGTGATTGGGCTGCTGGTCTTGATGTTGTAAGATATGGTGCTGGAGGTTGTGAGGCGCATCTTAATATAAGAGGTGCAACTTACACATTTAATGATGCTGGGTATGCGTCTGCTGTTCAGTGGGTTAACACATCCGATATTCGCCTGAAAGCAAATCTAAAAGAGATTGAAAGCGCTAAAGAAAAAGTGAAATCGATTAAGGGTTATACTTATTTTAAGCGTAATAATCTTGATGAAGATGAACACTCTATTTATTCTGAGGAAGCGGGTGTAATAGCTCAGGATGTGCAGGCTGTTTTGCCGGAGGCTGTTTATAAAATCTCTAACAGTGAGTATTTAGGTGTAAGTTATAGTGGTATTACCGCTCTCCTAGTTAACGCTTTTAATGAACTTAATGAAGTTGTTGAAAAGCAGCAGCAAGAAATTGATGAACTTAAGAAATTGGTAAAACAATTACTTGGTAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
bf1c1e9133fa7717e898b9577f3236cdbcfa491492dd8f43cacf0282784a30c5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7378
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of a Diverse Collection of Salmonella Phages Isolated from Tennessee Wastewater Bryan,D.W., Hudson,L.K., Wang,J. and Denes,T.G. — — GenBank