Protein

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Genbank accession
ATS93183.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,84
TF
Evidence RBPdetect2
Probability 0,69
Protein sequence
MPFKYNALLGLGLDNTIPLDGAGKIPSTFLPSYVDDVEEYNNLAAFPATGETGKIYVAIDTGFVYRWSGSVYVQIGITAAAGSTTQVQFNDGGAFGGDSGLTFDKTTDALTAGSLRTTSLGTAAAPSFTIVGDPNTGIYSPGADQLAVSTGGTGRLFISSTGLVGIGTSAPQAKFEVAGDAVIGTDNAGLVEFTSLGVPFFAVAADASNYRSTRINIVSAGGWADLSFDAIGTAPKTGLPSAGSFSGSIMYLDASAQRVGIGSTSPDALLTVNGIGAFGAGAVTTPSIAQTGDLNTGFWFPAADTIAASTAGSERARIDSSGRLLVGTSTAASNVYVKGDFASSAATTPAQQLAVSGSSYNGASIVSYSTKGYAGTLSLSSSKNNTIGTNAIVVNNQAVGVLSFSGNDGTNFIPCAEIKGTVDGTPGADDMPGRLVFSTTADGSASPTERLRITSDGVQAYNQPAPAAVNATATLTVANLKAGIITSTSAAATDMTLPTGTDTQAGFSGTYDNFTFEWSVINTGPSLVRVLAATAHTIVGSGSVATGTSGRFASRRTASNTFVSYRLS
Physico‐chemical
properties
protein length:568 AA
molecular weight: 57089,37080 Da
isoelectric point:4,57658
aromaticity:0,08275
hydropathy:0,12606

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ATS93183.1
1 568
Domain Start End Length (AA) Confidence
N-terminal 1 232 232 0,4145
Central domain 233 431 200 0,1746
C-terminal 432 568 136 0,9553
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-232
Central
233-431
C-terminal
432-568

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-LBS1
[NCBI] 		2008320 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. TCC793
[NCBI] 		2057980 Cyanobacteriota > Cyanophyceae > Synechococcales > Synechococcaceae > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ATS93183.1 [NCBI]
Genbank nucleotide accession
MG271909.1 [NCBI]
CDS location
range 8292 -> 9998
strand +
CDS
ATGCCGTTTAAGTACAACGCGCTGCTTGGCCTGGGCCTTGACAACACCATCCCGCTAGACGGTGCTGGCAAGATCCCCTCGACGTTTTTGCCCAGCTACGTTGACGACGTCGAAGAGTACAACAACCTTGCGGCATTTCCAGCCACAGGCGAAACCGGCAAAATCTACGTCGCCATCGACACCGGATTTGTCTACCGCTGGAGCGGCTCCGTCTACGTCCAGATCGGCATAACAGCCGCCGCCGGCTCCACCACCCAAGTCCAGTTCAACGACGGCGGTGCCTTCGGTGGCGACAGCGGCTTGACGTTCGACAAAACCACCGACGCCCTTACTGCGGGTAGCCTTAGAACCACGTCACTTGGCACTGCTGCTGCACCTTCGTTTACCATCGTTGGCGACCCCAACACCGGCATCTACTCCCCCGGCGCTGACCAACTAGCGGTTAGCACGGGTGGGACTGGGCGTCTATTCATAAGCAGCACTGGGCTAGTAGGCATAGGGACATCTGCGCCTCAGGCAAAATTTGAAGTTGCTGGTGATGCTGTTATTGGAACCGACAACGCGGGGCTAGTTGAATTTACTTCGCTAGGAGTTCCCTTTTTTGCTGTTGCTGCTGATGCGAGCAATTATCGGTCCACAAGAATTAATATAGTTAGTGCGGGTGGATGGGCAGATTTATCATTTGACGCGATAGGTACTGCCCCGAAAACTGGACTGCCTAGCGCCGGAAGCTTTTCAGGAAGCATTATGTATCTTGATGCATCTGCACAGCGAGTAGGGATTGGCTCTACTAGCCCTGACGCGCTGCTAACCGTCAACGGCATCGGGGCATTCGGAGCTGGTGCTGTCACCACTCCATCCATTGCACAAACAGGTGACCTAAACACTGGATTCTGGTTCCCTGCTGCTGACACTATTGCCGCATCTACTGCTGGTTCCGAACGAGCCCGCATCGATTCCAGCGGCAGGCTCTTAGTTGGTACGTCTACTGCTGCCAGCAATGTATATGTCAAAGGGGATTTTGCCTCTAGTGCCGCGACAACGCCTGCGCAGCAGTTGGCGGTTTCGGGCTCAAGTTATAACGGCGCCAGCATTGTTTCGTACAGCACAAAGGGATACGCCGGAACCTTAAGTCTTTCATCTTCCAAAAATAACACTATAGGAACTAATGCAATTGTTGTTAACAACCAAGCTGTCGGAGTTCTTTCTTTTAGTGGAAATGACGGCACTAATTTTATACCATGTGCTGAAATTAAAGGCACAGTAGACGGCACCCCTGGCGCTGATGATATGCCAGGCCGCCTAGTGTTCTCCACTACGGCAGACGGGTCAGCATCTCCTACGGAGCGGCTTCGTATTACCAGCGATGGCGTACAAGCATACAACCAACCAGCTCCTGCTGCTGTCAACGCCACTGCAACACTAACCGTTGCAAACCTGAAAGCTGGCATCATCACCAGCACCTCGGCAGCGGCTACCGACATGACGCTGCCTACTGGCACCGATACACAAGCTGGATTCAGTGGCACTTACGACAACTTCACATTTGAGTGGAGTGTGATTAACACTGGCCCCAGTTTGGTGAGGGTGCTGGCTGCCACTGCTCACACTATTGTCGGCTCTGGTTCTGTTGCCACTGGTACGTCGGGACGATTTGCCTCACGGCGGACAGCGAGCAACACTTTTGTTTCCTATCGCCTGAGCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
80feded9cb4f7d9ba195aec3fd7ef6b5047d5bd1bfa386eccff7dabe4adee812
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7554
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A new and original freshwater cyanosiphovirus harbouring integrase as well as genes related to iron-acquisition and resistance against phages Zhong,X.K. and Jacquet,S. 2018-09-19 — GenBank