Protein

View in Explore
Genbank accession
ALH23509.1 [GenBank]
Protein name
putative virion structural protein
RBP type
TF
Evidence RBPdetect2
Probability 0,54
Protein sequence
MGGSSKAQTVGYKYYLGMHAIMCHGPVDKVTRFSVDGKVAWSGTSTGGAVSVNAPQLFGGDEREGGVSGTIDIEMGTPSQGRNAYLQSQLGSSIPAFRRVLGLVFRQCYLGNNPYLKRWAIRATRIQVRQDGIAQWYSAKADVGGDMNPAHIIREVLTDPDWGMGYPEADVDNASFTAAADTLYSEGMGMSILWDKQQQLSDFLAIVLRHVDGSLYTDRATGKFVLKLARGGYDIPSLLLLDESVVERVTDFKRSTVAELTNQVSVVYWDKSTGKNNSVTVQDIALAASQGATVGTTSQYPGFTNGTIATKAAARDLKALSTPLASATLYVTRKAASLNIGDVFRFAWAEYGISQVVFRVTNIELGELTSNLIKLSVVEDVFALSSAIYSPPPPSEWTNPIGAPVPVPFRLLTEVPYYLIARTLGDSGAQALPQTASYMMVGGTNPGGSAYSAQVYVDEGAGYQQQAVANFCPTAVISAAYGQADTALAITGGLDLDLVQVGDVAAIGVGAISTREMVQVVSITDTLLTVKRGMLDTVPVPIASNTRVIFLGSGDNPSVVELPNEYALGESVSVRMLTTTGQGTLTLGSGATDTLAVNATAGRQWRPYPPGLFRVNGNPYPAQVSGYDGVSLTWAHRDRIQQTAQTLVDQNAASVGPEPGVTYVARVLNSSTSAVLKTLSGLTGTSATFTTLDLGGVANVRAEVYSVRAGVESLLRQYDEFVRVDENGQPIGPGFGSSVAMENYLYDGARFLAASQAYVGPTASQTPVTRFYGSTDGGVTFEYMGTMDGANMFSRQKPGMAKGTSRYASFPKYYASVGSSATWYNSQVADFARSYPPRPWTTSNITGAKPLCMAWDASNSRFVRIMDDKTAQSSTDGLTWSSLGALTLPSVGSGWTWYTGMWMELFKVGSYWYAFHSGKGSQFQADSVMLMRSTNLLTWSICPGTGFYDYPASVTGGWQFFRPYGVAARSATSFVITAMGRRNVGDGNMKELVLRSTDGLNFTLVSEVAMVSGASTGNDFQEVEAFGATGYVATGPGGLNVSNDDGATWARTAMANYPTALRANGTNVVGSRPTAAGGANEPWYTSNGTTWTKSTIRNYNSGTRRYWRVRATAAAADVTFAELAFFNGATKHTTYTKSQGAGTGLASVDDNDPATFWTATAANVTAGTAWVAYDFASAVDVTAVELRNPTGDNTKMPTDIEVEASADGVNWVPVWFETGLSWGTNENKRMEKTS
Physico‐chemical
properties
protein length:1234 AA
molecular weight: 131600,72330 Da
isoelectric point:5,41775
aromaticity:0,10130
hydropathy:-0,12042

Domains

Domains [InterPro]
DC_1879
ATT
2–210
DC_1879 DC_1311 IPR000421
IPR032876
ATT
196–364
IPR032876 G3DSA:2.60.120.260
IPR032876
ATT
202–363
IPR032876 IPR008979
IPR000421
RBD
1137–1214
IPR000421
ALH23509.1
1 1234
Architecture
ATT
RBD
RBD
STR
ATT 2-364 | RBD 365-724 | RBD 1113-1126 | STR 1127-1234
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PaMx74
[NCBI] 		1175663 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ALH23509.1 [NCBI]
Genbank nucleotide accession
JQ067093 [NCBI]
CDS location
range 29791 -> 33495
strand +
CDS
ATGGGCGGAAGTAGCAAGGCGCAGACCGTAGGGTACAAGTATTACCTCGGCATGCACGCCATCATGTGCCACGGGCCGGTGGACAAGGTCACCCGGTTCAGCGTGGACGGCAAGGTCGCGTGGAGTGGCACCAGCACGGGCGGCGCGGTCAGCGTGAACGCCCCGCAGCTGTTCGGCGGAGACGAGCGCGAGGGCGGCGTGTCCGGCACGATCGACATCGAGATGGGCACGCCGTCGCAGGGGCGCAACGCCTACCTGCAGAGCCAGCTCGGGTCGTCCATCCCGGCCTTCCGCCGGGTGCTCGGCCTCGTGTTCCGGCAGTGCTACCTGGGCAACAACCCCTACCTGAAGCGGTGGGCGATCCGCGCGACCCGCATCCAGGTACGCCAGGACGGCATCGCGCAGTGGTACTCCGCCAAGGCGGACGTCGGCGGCGACATGAACCCGGCCCACATCATCCGCGAGGTCCTCACCGACCCGGACTGGGGCATGGGCTACCCCGAGGCGGACGTCGACAACGCCTCCTTCACGGCTGCCGCCGACACGCTCTACTCCGAGGGCATGGGCATGTCCATCCTCTGGGACAAGCAGCAGCAGCTCTCGGACTTCCTTGCGATCGTGCTGCGGCACGTCGACGGGTCCCTGTACACCGACCGGGCCACTGGCAAGTTCGTGCTCAAGCTGGCGCGCGGCGGCTACGACATCCCGTCCCTGCTCCTGCTCGACGAGTCGGTCGTGGAGCGCGTGACGGACTTCAAGCGCTCGACCGTGGCCGAGCTCACCAACCAGGTGAGCGTCGTCTACTGGGACAAGTCGACGGGCAAGAACAACTCGGTGACCGTGCAGGACATCGCGCTGGCTGCGAGCCAGGGCGCGACCGTCGGCACGACCTCCCAGTATCCTGGCTTCACCAACGGGACCATCGCCACCAAGGCCGCAGCCCGCGACCTGAAGGCCCTGTCCACGCCGCTCGCGTCCGCCACCCTGTACGTCACCCGCAAGGCCGCGAGCCTGAACATCGGCGACGTGTTCCGCTTCGCATGGGCCGAGTACGGCATCTCGCAGGTGGTCTTCCGGGTGACCAACATCGAGCTCGGCGAGCTGACGAGCAACCTCATCAAGCTGTCGGTCGTGGAGGACGTGTTCGCCCTGTCGAGCGCCATCTACTCGCCGCCTCCCCCGAGCGAGTGGACCAACCCGATCGGCGCGCCCGTGCCCGTGCCGTTCCGCCTGCTGACCGAGGTTCCCTACTACCTGATCGCCCGCACGCTCGGCGACTCCGGCGCCCAGGCCCTGCCGCAGACCGCGTCCTACATGATGGTCGGCGGCACCAACCCCGGCGGCTCGGCCTACAGCGCGCAGGTCTACGTCGACGAGGGCGCAGGCTACCAGCAGCAGGCCGTGGCGAACTTCTGCCCGACGGCCGTCATCTCGGCCGCCTACGGCCAGGCTGACACCGCGCTCGCCATCACCGGCGGGCTCGACCTCGACCTGGTGCAGGTCGGCGACGTCGCGGCGATCGGCGTGGGCGCGATCAGCACCCGCGAGATGGTCCAGGTCGTGTCCATCACCGACACCCTGCTGACCGTCAAGCGTGGCATGCTGGACACCGTGCCGGTGCCCATCGCGTCCAACACGCGGGTCATCTTCCTCGGCAGCGGCGACAACCCCTCGGTCGTCGAGCTGCCGAACGAGTACGCCCTCGGCGAGTCGGTCAGCGTGCGCATGCTGACCACCACCGGTCAGGGCACCCTGACCCTCGGCTCCGGCGCGACCGACACCCTGGCGGTCAACGCAACGGCCGGCCGCCAGTGGCGCCCGTACCCGCCGGGCCTGTTCCGCGTGAACGGCAACCCCTACCCGGCGCAGGTCAGCGGCTACGACGGCGTGTCCCTCACCTGGGCGCACCGCGACCGCATCCAGCAGACGGCGCAGACCCTCGTCGACCAGAACGCGGCGAGCGTCGGCCCCGAGCCCGGGGTCACCTACGTCGCGCGGGTGCTGAACTCCAGCACGAGCGCGGTGCTCAAGACGCTCAGCGGTCTGACCGGCACCTCGGCGACCTTCACCACCCTGGACCTGGGCGGCGTCGCGAACGTGCGGGCCGAGGTCTACTCGGTCCGCGCCGGCGTGGAGTCGCTGCTCCGCCAGTACGACGAGTTCGTGCGCGTGGACGAGAACGGGCAGCCGATCGGCCCCGGCTTCGGCTCCTCGGTCGCGATGGAGAACTACCTGTACGACGGCGCCCGCTTCCTGGCGGCGAGCCAGGCCTACGTCGGCCCGACGGCGAGCCAGACGCCGGTCACCCGCTTCTACGGGTCGACCGACGGCGGCGTGACGTTCGAGTACATGGGCACGATGGACGGCGCCAACATGTTCAGCCGCCAGAAGCCCGGCATGGCCAAGGGCACAAGCCGCTACGCGTCCTTCCCGAAGTATTACGCCTCGGTCGGGTCGTCGGCCACATGGTACAACTCGCAGGTGGCCGACTTCGCCCGCTCCTACCCGCCTCGCCCGTGGACGACGTCCAACATCACCGGCGCCAAGCCGCTCTGCATGGCCTGGGACGCCTCCAACTCCCGCTTCGTGCGGATCATGGACGACAAGACAGCCCAGTCCTCCACCGACGGCCTGACCTGGAGCAGCCTCGGCGCGCTGACGCTCCCGAGCGTCGGCAGCGGCTGGACTTGGTACACTGGCATGTGGATGGAGCTCTTCAAGGTCGGCTCCTACTGGTACGCCTTCCACAGCGGCAAGGGGTCGCAGTTCCAGGCCGACAGCGTCATGCTGATGCGCTCGACGAACCTGCTGACCTGGTCCATCTGCCCCGGGACCGGCTTCTACGACTACCCGGCCTCCGTGACCGGCGGCTGGCAGTTCTTCCGCCCCTACGGCGTGGCGGCGCGCAGCGCGACTAGCTTCGTCATCACCGCGATGGGCCGGCGCAACGTGGGCGACGGCAACATGAAGGAGCTCGTGCTGCGCTCGACCGACGGGCTGAACTTCACCCTCGTCAGCGAGGTGGCAATGGTCAGCGGCGCGTCGACCGGCAACGACTTCCAGGAAGTCGAGGCCTTCGGCGCGACCGGCTACGTGGCGACCGGGCCTGGTGGGCTGAACGTGAGCAACGACGACGGGGCCACCTGGGCCCGCACGGCGATGGCCAACTACCCGACCGCGCTGCGCGCCAATGGCACCAACGTCGTGGGGTCTCGGCCTACGGCGGCTGGCGGCGCGAACGAGCCGTGGTACACTTCCAACGGTACGACCTGGACCAAGTCCACGATCCGCAACTACAACTCGGGCACCCGCCGCTACTGGCGCGTCCGGGCGACGGCCGCGGCCGCGGACGTGACCTTCGCGGAGCTGGCGTTCTTCAACGGGGCGACGAAGCACACGACCTACACCAAGTCGCAGGGCGCCGGCACGGGCCTCGCGAGCGTGGACGACAACGACCCGGCGACCTTCTGGACCGCCACCGCCGCCAACGTGACGGCCGGCACGGCCTGGGTGGCGTACGACTTCGCCTCGGCCGTCGACGTGACCGCGGTGGAGCTCCGGAACCCGACAGGGGACAACACCAAGATGCCGACCGACATCGAGGTGGAGGCTAGCGCCGACGGCGTGAACTGGGTCCCGGTGTGGTTCGAGACGGGCCTCTCCTGGGGCACGAACGAGAACAAGCGCATGGAGAAGACGAGCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
b1c5422dd21ac12ba49aa5ec43c6a23b3b6077a277327fa8867bc84e41a19803
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2871
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
High Diversity and Novel Species of Pseudomonas aeruginosa Bacteriophages Sepulveda-Robles,O., Kameyama,L. and Guarneros,G. 2012 22504803 GenBank