Protein

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Genbank accession
WAQ79564.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MATTPTSLPIPSEDPRDLKFNAGKFDEVMTSDAHYYVDRFGVKRWTIAGFQYTAEEAIRAYGYITMDSFEDGATLTLPNQVLRYEATGEYYRWDGAFPKAVAAGSTPASTGGVGLGAWISVGDAAFRQEANKKFKYSVKLSDYSTLQEAATAAVDGVLIDRDYTFTDNETVDFGGKVLTIDCKAKFIGDGALIFTNMGSGSIIEKPFMESATTPWVIYPWTEDGKWITDAQAVAATLKQSKTEGYQPGVNDWVKFPGLEALIPQNVKDQHVASTLDIRECVGIEVRSAGGLMAAYLFRNCHHCKVIDSDTIIGGKEGIITFENLSGEWGIGNYAIGGRVHYGSGSGVQFLRNNGGASHNGGVIGVTSWRAGESGFKTWQGSVGAGTARNYNLQFRDSVALSPVWDGFDLGSDPGMAPEDDRPGDLPVSQYPMHQLPNNHMVDNILVMNSLGVGLGMDGRDGYVSNVTVQDCAGAGMLAYTFNRTFSNITVIDCNYMNFDSDQIIIIGDCIVNGIRAAGIKPQPSKGMVISAPNSTLSGVVGNVPSDRILAANIIDSALGQTRINGFNSDSVEMGLRVHKLTKTLDSGAIRSTLNGGPGSGSAWTEITAISGSLPDAVSLKINRGDYHAVEIPVAVTVLPDAAVRDNGSIALYLEGDSLKALVKRADGSYTRLTLA
Physico‐chemical
properties
protein length:675 AA
molecular weight: 72171,17880 Da
isoelectric point:4,98838
aromaticity:0,08889
hydropathy:-0,13230

Domains

Domains [InterPro]
DC_1559
ATT
1–175
DC_1559
G3DSA:2.10.10.80
ATT
63–119
G3DSA:2.10.10.80 IPR012332
IPR040775
RBD
64–123
IPR040775 IPR011050
IPR011050
STR
126–675
IPR011050
IPR015331
RBD
129–675
IPR015331
WAQ79564.1
1 675
Architecture
ATT
STR
ATT 1-175 | STR 176-675
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WAQ79564.1
1 675
Domain Start End Length (AA) Confidence
N-terminal 1 146 146 0,9903
Central domain 147 589 444 0,9823
C-terminal 590 675 85 0,8644
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-146
Central
147-589
C-terminal
590-675

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage INT55
[NCBI] 		3003234 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella sp.
[NCBI] 		599 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WAQ79564.1 [NCBI]
Genbank nucleotide accession
OP745620.1 [NCBI]
CDS location
range 9356 -> 11383
strand -
CDS
ATGGCTACCACACCGACTAGCTTACCAATCCCGTCAGAAGACCCGCGCGACCTGAAGTTTAACGCTGGTAAATTTGATGAAGTCATGACATCTGATGCACATTACTATGTGGACAGATTTGGCGTAAAACGCTGGACTATTGCTGGATTCCAGTACACTGCGGAAGAGGCCATTCGTGCTTATGGATATATCACAATGGATAGCTTTGAAGATGGCGCGACGTTGACGCTACCAAATCAGGTGCTACGTTACGAGGCAACCGGAGAATATTACCGATGGGATGGTGCATTTCCTAAGGCTGTAGCTGCTGGTTCAACTCCTGCATCAACTGGTGGCGTTGGTTTAGGCGCGTGGATTAGTGTTGGTGACGCAGCATTTAGACAGGAAGCCAACAAAAAATTCAAATATTCAGTAAAATTATCAGATTATTCTACCTTGCAGGAAGCAGCAACAGCAGCAGTTGACGGAGTGTTGATTGACCGCGACTATACATTCACCGACAACGAGACAGTTGATTTTGGCGGCAAAGTACTAACCATCGACTGTAAAGCTAAGTTTATTGGTGATGGGGCTTTGATTTTCACTAATATGGGTAGTGGTTCTATAATAGAAAAGCCTTTCATGGAGAGCGCTACGACCCCGTGGGTTATTTACCCCTGGACAGAAGATGGGAAGTGGATTACAGATGCACAAGCTGTCGCTGCTACACTTAAACAATCTAAGACTGAGGGGTATCAACCGGGAGTTAATGATTGGGTCAAGTTCCCTGGTCTTGAGGCATTGATACCACAGAATGTAAAAGACCAGCATGTAGCGTCCACGCTGGATATCCGTGAGTGTGTAGGTATTGAGGTCAGAAGTGCTGGTGGACTTATGGCTGCTTACTTGTTCCGCAACTGTCATCATTGTAAGGTGATTGATTCTGACACCATCATTGGTGGTAAAGAAGGCATCATCACCTTTGAAAACTTAAGTGGTGAGTGGGGCATCGGCAACTATGCCATAGGTGGCCGTGTGCATTATGGCTCAGGTAGTGGTGTGCAGTTCCTTCGAAACAACGGAGGTGCGTCGCACAATGGTGGGGTTATTGGTGTGACGTCATGGCGCGCGGGTGAGTCTGGGTTTAAAACATGGCAAGGCTCTGTAGGTGCCGGTACAGCTCGCAACTATAACCTTCAGTTCCGTGACTCAGTTGCATTATCTCCAGTGTGGGACGGCTTTGACTTAGGCTCAGACCCGGGAATGGCGCCGGAAGACGATAGACCGGGAGATCTACCTGTATCTCAATATCCTATGCATCAGCTACCTAATAACCACATGGTTGATAACATCCTTGTTATGAACTCATTAGGTGTAGGTTTAGGCATGGATGGTCGTGATGGTTATGTGTCGAATGTTACCGTGCAGGATTGTGCGGGCGCTGGTATGCTTGCTTACACATTCAACCGTACCTTCTCTAACATTACGGTGATTGACTGCAACTATATGAACTTTGATTCAGACCAGATAATCATCATTGGTGACTGTATTGTAAATGGTATCCGAGCCGCAGGCATCAAGCCTCAGCCATCCAAAGGTATGGTCATCAGCGCACCTAACTCGACCCTAAGTGGTGTTGTAGGTAACGTGCCATCAGACCGTATTCTTGCTGCTAACATTATTGATTCTGCGTTAGGGCAGACAAGGATTAATGGGTTTAATAGTGACTCGGTGGAAATGGGTTTAAGAGTCCATAAGCTTACCAAAACCTTGGATAGTGGTGCTATTCGCTCTACGCTGAATGGTGGCCCCGGTTCTGGTTCCGCCTGGACTGAAATTACGGCTATTTCTGGGTCATTACCGGATGCGGTATCACTAAAAATTAACCGCGGCGACTATCACGCGGTAGAAATACCAGTAGCCGTTACCGTGCTACCCGATGCTGCCGTTAGAGATAATGGCAGCATCGCACTATACCTAGAAGGCGATAGTCTTAAAGCATTAGTTAAGCGCGCAGACGGCAGCTATACAAGATTGACTTTGGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c1caf61474f6990268b5a318459613ca4348f07d3a4005c41fb2bd6c30392db9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6876
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50