Protein

View in Explore
Genbank accession
NP_690774.1 [GenBank]
Protein name
pre-neck appendage protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MLRLKKNYDTTRNSRYEDELSGDMEAIESSINGLESEITRHKKAATAHTSEQIDHGGFSLRTYIDSLYNRVRNLILNADGTNVKEVVDARVNADGEIAPLLKERLDKEYNKLLRKITRNVNVDDYGADPTGETDSTEAFKRAIGNGKVRLNLSAGEYVIRGAKLPSWTYLIGQGMGVTTLKLHEDTPASEWVVTNADHAKGNRNIVVEGMSLDWNPDRQGGVGATGGVHSSCLLFAQVKFGIARGVEGINPGLHCFDVSAPSYDITAKDYTATGSKFIWIDQCVGSGYGDDGITTHYSEYISITNNVMTNPRGTAHRKGGANSNGIEVDDGSKHVWVIDNYTEGNVRGVEVKAHKEWPAPSDVHIRGHESFRDVRSFDLRHIDHHLVKDPWSETARDVTLINCTSREPVYNSLYEGLAPKALVVSAYQRVQIIGFKAIGDPTYDYKDGSIIAFQYKSRKITVNNLHITGFKKADCDIYITGGDQMTDDVFISDFVIHDSARTGIAIGGGVYNVNLLNGLMHVASGTAGITSPNTQTNIFLVRAYGYKDAAVIAGEKHSVVPNNVKGGFRAASGSGHALTKYSAIIACTGATYAKGERNLLAGNAGGSSSEGSRNGVMFSYDSHTTGDGASSGVMFSKATKNSKSYTLALGHGNGKASEANKKIELNAKNGTVKATGAIESVSNLKDLAEYFESADGAKIEASYLVALEGDKIRKAQEGDKILGVVSKTAGVVLGGAAFYWNDRFLRDEFGGIIYREVFDGEDIITIPAENPNYDPEAEYKPREERDEWHIIGLIGQVFVRVDDTVNVGDSVSAVDGIATKAESGGYGTVMRFESPYDAEKGYGMAQMMVTPQH
Physico‐chemical
properties
protein length:853 AA
molecular weight: 92501,01190 Da
isoelectric point:5,80846
aromaticity:0,08206
hydropathy:-0,38933

Domains

Domains [InterPro]
DC_0125
ATT
1–179
DC_0125 IPR006626 IPR006626 IPR006626 IPR006626 IPR006626 IPR021865
Coil
Unmapped
17–44
Coil IPR012334 G3DSA:2.40.300.10
IPR011050
STR
117–405
IPR011050 G3DSA:4.10.80.40
IPR024535
ENZ
120–330
IPR024535 DC_0616
NP_690774.1
1 853
Architecture
ATT
STR
CHP
RBD
ATT 1-179 | STR 180-631 | CHP 633-685 | RBD 686-849 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
NP_690774.1
1 853
Domain Start End Length (AA) Confidence
N-terminal 1 134 134 0,9878
Central domain 135 660 527 0,9721
C-terminal 661 853 192 0,9223
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-134
Central
135-660
C-terminal
661-853

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage phi105
[NCBI] 		10717 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Bacillus subtilis
[NCBI] 		1423 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
NP_690774.1 [NCBI]
Genbank nucleotide accession
NC_004167 [NCBI]
CDS location
range 15581 -> 18142
strand +
CDS
GTGTTGAGGTTGAAAAAAAATTACGATACCACTAGAAACTCTCGTTATGAGGATGAGTTATCTGGTGATATGGAAGCGATCGAGAGTAGCATAAACGGACTTGAAAGTGAAATTACCCGTCATAAGAAAGCTGCTACAGCACATACTTCTGAGCAAATTGATCACGGGGGCTTTTCTTTACGAACCTATATTGACAGTCTCTATAATCGGGTGCGCAATCTCATTCTTAATGCCGACGGGACAAATGTAAAAGAAGTAGTGGACGCCCGTGTTAATGCTGATGGGGAAATTGCCCCACTGCTGAAAGAGCGTCTCGACAAGGAATATAACAAACTTCTGCGCAAGATCACCAGAAACGTTAACGTAGACGACTACGGGGCCGACCCGACCGGAGAGACAGACAGCACAGAAGCATTTAAAAGAGCGATTGGAAACGGAAAGGTGCGGCTCAATCTGTCAGCCGGCGAATATGTCATAAGAGGCGCCAAACTGCCATCATGGACGTATTTGATCGGCCAGGGCATGGGCGTCACCACGCTGAAGCTGCACGAGGACACGCCGGCCAGTGAGTGGGTTGTCACAAATGCTGATCATGCGAAAGGCAACCGGAATATCGTTGTGGAAGGTATGTCGCTTGACTGGAACCCTGATCGCCAAGGCGGCGTAGGCGCAACCGGCGGTGTACATTCAAGCTGTCTTCTTTTCGCACAAGTAAAGTTTGGTATTGCACGCGGCGTTGAAGGCATTAATCCCGGCTTACATTGTTTTGATGTATCAGCGCCTTCATATGACATCACAGCAAAAGATTACACGGCAACGGGGAGCAAATTTATCTGGATTGATCAATGTGTTGGCTCGGGGTATGGTGACGACGGCATTACGACCCATTACAGCGAGTATATTTCCATCACAAATAATGTGATGACGAACCCGCGCGGCACTGCACACCGTAAAGGGGGAGCCAATTCAAACGGAATTGAAGTGGACGACGGCTCCAAGCATGTCTGGGTTATAGATAATTATACAGAGGGGAATGTGCGGGGCGTAGAGGTAAAAGCCCATAAGGAATGGCCGGCACCGAGTGACGTTCACATTCGCGGTCATGAATCATTTCGTGACGTTCGCTCATTTGATTTACGGCATATTGATCACCATCTTGTAAAAGACCCTTGGAGCGAGACGGCTCGTGATGTGACGTTAATAAACTGCACATCCCGGGAACCCGTCTATAATTCGCTTTATGAAGGATTAGCTCCGAAAGCCCTTGTCGTTTCGGCGTACCAGCGAGTTCAGATAATCGGTTTTAAAGCGATTGGTGATCCGACATATGACTACAAAGACGGCTCGATCATTGCCTTCCAGTATAAGAGCAGGAAGATAACAGTAAACAACTTGCATATAACCGGATTTAAAAAGGCTGATTGTGACATCTATATTACCGGCGGCGATCAGATGACCGACGATGTATTTATTTCTGATTTTGTTATTCATGATTCCGCAAGAACCGGCATCGCGATAGGGGGCGGCGTATATAATGTCAACTTGTTAAATGGGCTTATGCATGTGGCAAGCGGAACGGCCGGCATTACATCCCCGAACACTCAGACCAATATTTTTCTTGTCAGAGCTTACGGCTATAAAGATGCGGCTGTCATTGCGGGGGAAAAGCATTCAGTCGTTCCGAATAACGTCAAGGGAGGCTTTCGAGCAGCTTCCGGCTCCGGCCATGCACTGACGAAATACAGTGCGATTATTGCGTGTACGGGGGCGACGTATGCGAAGGGTGAGCGCAATCTGCTTGCAGGAAATGCGGGAGGTTCTTCCTCGGAAGGATCGCGCAACGGTGTCATGTTTTCATATGATTCTCACACAACAGGAGACGGGGCGTCCTCGGGTGTCATGTTCTCGAAGGCTACCAAGAATAGTAAATCTTACACATTGGCTTTAGGCCATGGAAACGGCAAAGCCTCGGAAGCCAACAAAAAAATTGAATTAAACGCAAAGAATGGAACAGTCAAGGCTACTGGCGCAATAGAAAGTGTATCGAATTTAAAAGACTTGGCGGAGTATTTTGAATCAGCTGACGGAGCAAAGATAGAGGCATCTTATCTTGTAGCGTTAGAGGGGGACAAAATCCGAAAAGCGCAAGAAGGCGACAAGATACTCGGGGTCGTTTCTAAGACTGCCGGGGTTGTGCTTGGCGGAGCTGCTTTCTATTGGAATGATCGTTTTCTTCGTGATGAATTTGGCGGCATTATCTACCGGGAAGTATTTGACGGTGAGGACATCATTACGATTCCAGCTGAGAACCCGAACTATGATCCGGAAGCTGAGTACAAGCCACGAGAGGAACGAGACGAGTGGCATATTATTGGATTGATTGGTCAAGTGTTCGTGCGCGTTGATGATACCGTTAACGTCGGTGACAGTGTTTCAGCAGTTGACGGCATCGCGACAAAGGCGGAAAGCGGCGGATACGGAACCGTGATGAGATTTGAATCCCCGTACGATGCGGAAAAAGGGTACGGTATGGCGCAAATGATGGTTACACCGCAGCACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0d353507e65ff3bf97851a1f6480a5fdde6345f741c051e25675f55766520da0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7811
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete nucleotide sequence of Bacillus subtilis phage phi-105 Kobayashi,K., Okamura,K., Inoue,T., Sato,T. and Kobayashi,Y. 1984-09 — GenBank