Protein

View in Explore
Genbank accession
WOR80340.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MAISNGPNLGIMVNGALGDQHYNQFMSFLRAVDGLLMGHAKSATTTAQPASPADGDVYVLPASPTGTNWSGQGQRIARYSSAATAWEFFAPKKGWTISVEDTNSTYWYDGSAWKFLRGYGTTANRPAASAALVGGQYFDTTLGKPIWSTGSAWVDATGAAV
Physico‐chemical
properties
protein length:161 AA
molecular weight: 16993,67400 Da
isoelectric point:6,70822
aromaticity:0,12422
hydropathy:-0,17702

Domains

Domains [InterPro]
DC_0494
STR
1–160
DC_0494
IPR021251
STR
29–114
IPR021251
WOR80340.1
1 161
Architecture
STR
STR 1-160 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PSP2
[NCBI] 		3077134 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa PAO1
[NCBI] 		208964 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WOR80340.1 [NCBI]
Genbank nucleotide accession
OR538761.1 [NCBI]
CDS location
range 61325 -> 61810
strand +
CDS
ATGGCTATCAGTAACGGCCCGAACTTGGGCATCATGGTGAACGGCGCGCTGGGGGACCAGCACTACAACCAGTTCATGTCTTTCCTCCGTGCGGTGGACGGCCTTCTCATGGGCCACGCGAAGTCCGCGACCACGACCGCCCAACCGGCTTCGCCCGCGGACGGGGACGTGTACGTGCTCCCGGCGAGCCCGACCGGCACGAACTGGTCGGGTCAGGGCCAGCGGATCGCGCGTTATTCGAGCGCGGCGACGGCCTGGGAGTTCTTCGCGCCGAAGAAGGGGTGGACCATTTCCGTGGAGGATACCAACAGCACCTACTGGTATGACGGCAGCGCGTGGAAGTTCCTCCGCGGCTACGGCACGACCGCGAACCGCCCGGCGGCGAGCGCCGCCCTGGTCGGGGGCCAATACTTCGACACTACCTTGGGCAAGCCGATCTGGTCCACGGGCTCCGCCTGGGTGGACGCGACGGGCGCAGCCGTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c8123157f4aff3ff838adb01eef6b7569debc8bda29d54d98d9c6da0e84be7f6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8502
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Exploiting Phage-Antibiotic Synergies to Disrupt Pseudomonas aeruginosa PAO1 Biofilms in the context of Orthopedic Infections De Soir,S. and Wagemans,J. 2024-01-11 — GenBank