Protein

View in Explore
Genbank accession
WVW77529.1 [GenBank]
Protein name
tail assembly protein
RBP type
TSP
Evidence DepoScope
Probability 0,98
TF
Evidence RBPdetect
Probability 0,80
Protein sequence
MAQVVVAQRMWQRRATAAEWQSKNPVLAAGEIGVQLGANSDETKFKIGDGVTPWNSVKFFEGRLIELGTGGGYIRWRYVGDATWTNLVSLESLRGPAGSTGATGANGLSAYQVAVANGFAGTQPEWLASLKGAKGDQGVQGPPGIPSQRRIQRIADTTSGSVVCDWNSYDEIRVTLTTNTQINMTGALPGQGCVLLLKQDAVGSHAVTFSNNVRFNNLIKTYAATPTPGKADRLGFVYDDDDDYYDVQAVVDGI
Physico‐chemical
properties
protein length:254 AA
molecular weight: 27135,00060 Da
isoelectric point:5,47907
aromaticity:0,08661
hydropathy:-0,24134

Domains

Domains [InterPro]
DC_1473
STR
1–251
DC_1473
SSF69349
STR
9–140
SSF69349
WVW77529.1
1 254
Architecture
STR
STR 1-251 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WVW77529.1
1 254
Domain Start End Length (AA) Confidence
N-terminal 1 224 224 0,6808
Central domain 225 243 20 0,0026
C-terminal 244 254 10 0,9933
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-224
Central
225-243
C-terminal
244-254

Taxonomy

  Name Taxonomy ID Lineage
Phage Stenotrophomonas phage vB_SmaS_Bhz60
[NCBI] 		3097476 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WVW77529.1 [NCBI]
Genbank nucleotide accession
OR797045 [NCBI]
CDS location
range 22758 -> 23522
strand -
CDS
ATGGCCCAGGTAGTTGTTGCCCAACGCATGTGGCAGCGCCGCGCAACTGCGGCGGAGTGGCAGTCGAAAAACCCGGTCCTCGCGGCCGGGGAAATCGGCGTGCAGCTCGGTGCCAACTCGGACGAGACCAAGTTCAAGATCGGCGATGGCGTCACCCCCTGGAACAGCGTCAAGTTCTTCGAGGGTCGACTCATCGAGCTGGGCACGGGCGGCGGCTACATCCGCTGGCGCTATGTAGGCGATGCCACGTGGACGAACCTCGTGTCGCTGGAATCGCTGCGAGGCCCGGCTGGCTCCACGGGCGCTACCGGCGCGAACGGCCTGAGCGCGTATCAGGTGGCAGTGGCGAACGGATTCGCCGGTACGCAGCCGGAGTGGCTGGCCTCGTTGAAAGGTGCGAAGGGCGACCAGGGTGTTCAAGGTCCGCCCGGCATTCCGTCGCAGCGTCGCATCCAGCGCATTGCAGATACCACCAGCGGCTCGGTAGTGTGCGACTGGAACTCCTACGATGAAATCCGCGTCACGCTCACGACCAACACGCAGATCAACATGACGGGCGCGCTGCCCGGCCAGGGCTGCGTGCTGCTGCTGAAACAAGACGCCGTTGGCTCTCATGCGGTGACCTTCAGCAACAACGTTCGCTTCAACAACCTCATCAAGACCTACGCCGCCACGCCGACGCCCGGCAAGGCGGACAGGCTTGGTTTCGTTTACGACGATGACGACGACTACTACGACGTACAGGCAGTGGTCGATGGGATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c8c2c7da27978ba22568037e5b43dcf8dd23d07544ad1a7c8b3bea89c9275b24
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8991
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of new Stenotrophomonas phages Wittmann,J. and Mamat,U. 2014-01-22 — GenBank