Protein

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Genbank accession
YP_010747565.1 [GenBank]
Protein name
putative tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,96
Protein sequence
MSSGCGDVLSLNDLQVAKKHQIFEAEVITGKQGGVAGGADIDYATNQVTGQTQKTLPAVLRDAGFSPASFNFTTGGTLGVNDADKAVLWPKEDGGDGNYYAWRGSLPKVIPAASTPLTTGGISDSAWVAFGDITFRAEADKKFKYSVKLSDFTTLQQLADAAVDSVLIDRDYTFSNNETVNFGGKTLTIDCKAKFIGDGMLIWEQLGEGSVVNQPHMQTQTTPYTVYRFDDNGNWVTNPSTVLASVAQRMDKGYKPSVNDLDIWANLPDNVKNQVAGATLRIMSGDNIIVENPEATFGGYLFTLCNRILVKNPRNFIAWESGITFENHQTAAWGTGNWVVGGEIKYGSGSAVLFIRNDGGDDHNGGVRDLISYRVGESGVKTYQNEIGGRSARNYRLVFDNITTIQCYYDGIDINADTGPQVERVDDYPLSQYPWFQLPTKHIIRNIITRDCMGIGAWWDGQNNIIDNIVTYEAHKEGIFDRGTNNDITNVTVIGANKDLTNLNQLTCEGGSRLRGVLIHAYTTQGYAVYAPQSEISSVSCAGSGTKKILCTYVGDVQGGNINVQHNESQMTLAMRPAMGGTTNPSLLMTADCQIATPGNEASIVKLSAIQDGVRVGEMQLNRLGFKHMSIPVASLQLPDSALEHNSSIGFFFGSDGVLRILAKKPDGTYVTYTLS
Physico‐chemical
properties
protein length:676 AA
molecular weight: 73274,17660 Da
isoelectric point:5,09911
aromaticity:0,08876
hydropathy:-0,24896

Domains

Domains [InterPro]
G3DSA:2.10.10.80
ATT
65–136
G3DSA:2.10.10.80 IPR012332
IPR040775
RBD
71–132
IPR040775 IPR011050
IPR015331
RBD
138–675
IPR015331
YP_010747565.1
1 676
Architecture
ATT
STR
ATT 65-136 | STR 137-675 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010747565.1
1 676
Domain Start End Length (AA) Confidence
N-terminal 1 155 155 0,9927
Central domain 156 561 407 0,9900
C-terminal 562 676 114 0,8748
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-155
Central
156-561
C-terminal
562-676

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage S102
[NCBI] 		2231336 Uroviricota > Caudoviricetes > Sarkviridae > Jerseyvirus > Jerseyvirus S102
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010747565.1 [NCBI]
Genbank nucleotide accession
NC_073199 [NCBI]
CDS location
range 23719 -> 25749
strand +
CDS
ATGTCTAGTGGTTGCGGTGATGTATTGTCACTTAACGATTTACAGGTAGCTAAAAAACACCAGATTTTCGAAGCCGAGGTGATCACCGGTAAACAAGGCGGTGTAGCAGGCGGCGCGGATATCGACTACGCCACTAACCAGGTAACCGGGCAGACGCAGAAGACGCTTCCCGCAGTCTTACGTGATGCTGGTTTCTCCCCGGCATCTTTTAACTTTACGACTGGGGGTACTCTCGGCGTAAACGACGCAGATAAAGCGGTTCTTTGGCCGAAAGAAGATGGCGGGGACGGTAACTATTACGCATGGCGTGGCTCCCTGCCGAAAGTTATCCCCGCGGCGTCTACCCCTCTAACAACCGGTGGCATTTCTGATTCGGCTTGGGTCGCGTTCGGAGATATTACCTTTCGCGCGGAAGCGGATAAGAAATTTAAATACTCCGTTAAGCTGTCCGACTTTACTACGTTACAACAATTGGCGGATGCCGCCGTTGATAGTGTTCTTATTGACCGCGATTACACTTTCAGCAATAACGAGACCGTTAACTTCGGCGGGAAGACCCTGACCATCGACTGTAAAGCGAAGTTTATTGGTGATGGCATGTTAATATGGGAGCAACTCGGCGAAGGGTCTGTTGTGAACCAGCCACACATGCAGACACAAACCACGCCGTACACGGTGTATAGATTCGACGACAACGGTAACTGGGTGACTAACCCATCAACGGTGCTGGCGTCGGTAGCCCAAAGGATGGATAAGGGGTATAAGCCAAGCGTTAACGATTTAGATATTTGGGCCAACCTCCCTGATAATGTAAAAAATCAGGTTGCTGGCGCAACTTTGCGAATAATGAGCGGCGATAATATCATCGTAGAGAACCCAGAAGCTACATTTGGTGGGTATCTGTTCACACTCTGTAATCGTATTCTCGTAAAAAATCCACGTAATTTTATTGCCTGGGAGTCTGGTATTACATTTGAGAACCATCAAACAGCCGCATGGGGTACTGGTAACTGGGTGGTCGGTGGTGAGATAAAATACGGTTCTGGTTCTGCAGTTTTATTTATCAGAAATGACGGTGGTGATGATCACAATGGAGGGGTAAGAGACCTTATATCTTATCGTGTCGGGGAGAGCGGCGTAAAAACTTACCAGAACGAAATAGGGGGTCGGTCCGCCCGAAACTACCGTCTGGTGTTCGATAACATTACGACCATACAGTGCTATTACGACGGGATAGATATAAACGCGGATACAGGCCCCCAGGTTGAGCGCGTAGATGATTACCCGCTCTCCCAATACCCCTGGTTTCAGTTGCCGACTAAACACATCATCCGCAACATAATAACGAGGGACTGCATGGGTATTGGGGCCTGGTGGGACGGCCAGAATAATATCATCGATAATATTGTGACGTACGAGGCCCATAAAGAGGGTATTTTTGATAGAGGTACTAACAACGACATCACTAACGTAACGGTTATAGGTGCAAACAAGGATTTAACTAACCTGAATCAGCTTACATGTGAGGGCGGTAGCCGGCTGCGGGGGGTGTTGATTCATGCGTATACCACACAAGGATACGCCGTATATGCACCACAATCGGAAATATCGTCTGTTTCGTGTGCGGGTTCTGGTACGAAAAAGATACTTTGTACCTATGTTGGCGATGTACAAGGCGGCAACATCAACGTCCAGCATAACGAAAGCCAGATGACCCTTGCTATGCGCCCGGCTATGGGGGGCACAACAAATCCATCATTGCTTATGACAGCAGATTGCCAAATAGCAACGCCAGGAAATGAGGCAAGTATAGTTAAGCTTTCAGCAATCCAGGATGGGGTGCGTGTGGGTGAGATGCAGCTTAACCGCTTAGGCTTTAAGCACATGAGCATACCTGTTGCGTCTTTACAATTACCAGATAGTGCTTTAGAACATAACTCATCTATAGGTTTCTTCTTCGGCAGTGATGGGGTGTTGCGAATCCTTGCCAAGAAGCCAGACGGGACTTACGTAACCTACACCTTATCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1c563792f9a66da679b10c6c885b5e8e9ed2c692b5fa37d7f8f61b3af44a27d6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7292
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50