Protein

View in Explore
Genbank accession
QXV74552.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MGILAEQIAQQKEAQVPQGIVTVTPSDTVPLTKAIRGFMVTVAGDVSAVFADGTSGVMPGCTPGIQYMGKITRINLTGTAATGIKGFV
Physico‐chemical
properties
protein length:88 AA
molecular weight: 8981,37650 Da
isoelectric point:7,89965
aromaticity:0,04545
hydropathy:0,37841

Domains

Domains [InterPro]
DC_2205
STR
8–87
DC_2205
IPR061180
Unmapped
17–88
IPR061180
QXV74552.1
1 88
Architecture
STR
STR 8-87 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHEph19
[NCBI] 		2836125 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QXV74552.1 [NCBI]
Genbank nucleotide accession
MW980069.1 [NCBI]
CDS location
range 37877 -> 38143
strand -
CDS
ATGGGTATTCTTGCCGAACAGATCGCACAGCAAAAAGAAGCACAGGTTCCGCAAGGCATCGTGACCGTCACGCCGTCCGATACGGTGCCGCTGACCAAGGCGATTCGCGGCTTCATGGTCACAGTTGCCGGCGACGTCTCGGCGGTCTTTGCTGACGGGACTTCCGGTGTGATGCCGGGTTGCACTCCGGGCATTCAGTACATGGGCAAAATCACCCGAATCAATCTGACCGGGACGGCTGCGACAGGTATCAAGGGATTCGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d11e90c6039cdf9bd0a13e2d2b33347f5e61a836d2bb1e0fdca278e2ddf4947a
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8689
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Hidden Diversity of Double-Stranded DNA Phages in the Symbiotic Bacterium Rhizobium Santamaria,R.I., Bustos,P., Cauwenberghe,J.V. and Gonzalez,V. 2011 — GenBank