Protein

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Genbank accession
ALP46867.1 [GenBank]
Protein name
tail fiber
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MILGFGNNVVSALAGDITTIQTDIPVMPGTGAKFAKLLSADFENKSNGQRVYAKITLTDNKESAFEICHLVSVSGDVLKVIRGQEGTTAKGWSLNDVVANFATRGSENYFVQIAQLQSGHYIAGVAGGTANALTLELPSTFFVNGGTDWTLRTPIIVFPVQNNTNAATLQLTLGGKVLGTFPLYKGNKSGLVANDIIKGIPLICLLDSEKSYFSVINPGNIYSDFDLRYVKKSGDLMTGELKIRGVNALRIFNDAFGLIFRRSEECLHLIPTSEGQGENGDIGPLRPFTINLRTGEISMSHKVSVGGGSQVNGALGIGVQNALGGNSIAIGDSDTGFKQNGDGLLDVYTNGQHVFRFQNGALQSNRSVNVSGRVTPSDYGNFDARYQTKSGSVQNFQYTNEVFHNPGGNEITWTFRAPSGCVLSGIYVQETGSRSADNIGGVYYKQAQIYIDGAWRSVSG
Physico‐chemical
properties
protein length:460 AA
molecular weight: 49217,67070 Da
isoelectric point:6,60710
aromaticity:0,09130
hydropathy:-0,12413

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ALP46867.1
1 460
Domain Start End Length (AA) Confidence
N-terminal 1 277 277 0,7964
Central domain 278 449 173 0,1541
C-terminal 450 460 10 0,9980
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-277
Central
278-449
C-terminal
450-460

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage Rac-SA53
[NCBI] 		1759531 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ALP46867.1 [NCBI]
Genbank nucleotide accession
KU052037.1 [NCBI]
CDS location
range 45948 -> 47330
strand +
CDS
ATGATTCTTGGATTTGGCAATAACGTTGTTTCAGCACTGGCTGGTGATATCACGACGATTCAGACTGATATTCCGGTGATGCCGGGCACGGGAGCTAAATTTGCAAAATTGCTTTCTGCCGATTTTGAAAATAAATCGAACGGGCAACGCGTCTATGCAAAAATTACGCTTACCGATAATAAAGAGTCTGCATTTGAGATTTGTCACCTGGTATCGGTAAGCGGTGATGTGTTGAAAGTCATTCGTGGGCAGGAAGGAACGACCGCGAAAGGTTGGTCCCTTAATGACGTTGTGGCTAACTTTGCCACGCGTGGTTCGGAAAACTATTTCGTACAGATAGCGCAGCTTCAGAGCGGTCATTATATTGCGGGTGTTGCTGGTGGCACTGCAAACGCACTGACGCTGGAACTTCCCTCGACGTTTTTTGTTAATGGAGGTACAGACTGGACGCTACGAACCCCGATTATCGTTTTCCCCGTTCAGAACAATACCAACGCGGCGACACTTCAACTAACACTAGGCGGAAAGGTTCTTGGCACGTTCCCACTTTATAAGGGGAACAAGTCCGGGTTGGTAGCGAATGATATCATTAAGGGTATTCCTTTGATTTGTCTTCTTGATAGCGAGAAAAGCTATTTCAGCGTGATAAACCCTGGAAATATCTATTCAGATTTTGATCTGCGATATGTAAAAAAATCTGGTGATTTGATGACCGGGGAGCTGAAAATCCGTGGTGTTAATGCGCTGAGGATTTTCAACGACGCTTTTGGCCTTATTTTTCGTCGTTCGGAAGAGTGCCTGCACCTTATCCCTACCAGTGAAGGTCAGGGCGAGAATGGCGATATTGGTCCACTTCGCCCGTTCACTATTAATCTGCGGACGGGTGAAATATCCATGTCGCATAAAGTGTCTGTTGGCGGTGGTTCTCAGGTCAATGGTGCGCTGGGTATCGGCGTTCAGAACGCGCTGGGCGGAAACTCAATTGCAATTGGTGACAGTGATACTGGCTTTAAACAGAATGGTGACGGCCTGCTGGATGTTTATACCAATGGACAGCATGTATTCCGTTTTCAGAATGGCGCGTTACAAAGCAACCGGTCAGTGAATGTTTCAGGGCGGGTAACACCGTCAGACTACGGAAACTTTGATGCACGTTACCAGACGAAATCAGGGAGCGTGCAGAATTTTCAGTATACCAACGAGGTGTTTCACAATCCCGGAGGAAACGAAATCACGTGGACGTTTCGTGCTCCTTCAGGTTGTGTTTTATCTGGTATTTACGTTCAGGAAACGGGAAGCAGGTCAGCAGATAATATTGGTGGTGTGTATTACAAACAGGCTCAGATTTATATTGATGGCGCATGGCGCTCCGTATCAGGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6054b52ddc7ddf3de665bc55011e3fb8b94faac8abd79ea4e418b40998185516
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7724
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The chromosomal nature of LT-II enterotoxins solved: a lambdoid prophage encodes both LT-II and one of two novel pertussis toxin-like toxin family members in type II enterotoxigenic Escherichia coli (ETEC) Jobling,M.G. 2016-01-10 — GenBank