Protein

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Genbank accession
XAG97626.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,52
TF
Evidence RBPdetect2
Probability 0,90
Protein sequence
MIKFHKVSGKPAKVESGDENIWFSYPNGIYVADNQGNPRLISPGKMIGDAVPVGVPNEPGLFYYNTSNKKNYISTAEKWVEIGTGSIPGTGGGSNIAGNVLINDTADNYTSVDVEGALAEIAEKFPWYFGRMQLKDFNGDVNTLLKSTENYITTGAANRPNGKTGWLIQRKASNNNTYGFVIGDDGTAQTRINDRFTPLAAQSDLAKLQNTIDSSLGELKVNVGKGLASDGRTLANGQTISLSQDILDKIDAAGAGANFVKKAGDTMTGSLVMKAGSGQVSQVQFSSTGSANNVAILDDPRGTSKNSPYGGKEGGSRFRIANVRKNVDIMSAYSDGSVDIHAHGPRAVFGNVSTNGRTTILNNNNSGGTSVDIVAPFSDVPLFVKGKNGQLHYKVNGGMNSLLSGNSSSGRKNLRIAGMGSNSELATLYFEAWNTRAKGKIHSGSAINVGFNHETSKGTGDGDVCLRIFPRKAGLNGERNALRNYAVLYYEQYSQTLVVDSFKGNANFTSNERNNFVRLSSDGFITRSSVKYKNPIKKFEEDALSKVKEVTPELYAYKNDPKQSTQLGFIIEHGLPQEVVEMEGRGVNAYALTAYLWRATQQLSQEVDSLKEELENLRNS
Physico‐chemical
properties
protein length:620 AA
molecular weight: 66816,61230 Da
isoelectric point:8,89266
aromaticity:0,08226
hydropathy:-0,47710

Domains

Domains [InterPro]
DC_1220
STR
4–620
DC_1220
Coil
Unmapped
600–620
Coil
XAG97626.1
1 620
Architecture
STR
STR 4-620
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XAG97626.1
1 620
Domain Start End Length (AA) Confidence
N-terminal 1 149 149 0,9901
Central domain 150 348 200 0,0661
C-terminal 349 620 271 0,9685
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-149
Central
150-348
C-terminal
349-620

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterococcus phage VRE9_3
[NCBI] 		3141817 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Enterococcus faecium
[NCBI] 		1352 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XAG97626.1 [NCBI]
Genbank nucleotide accession
PP680569.1 [NCBI]
CDS location
range 129618 -> 131480
strand +
CDS
ATGATTAAGTTTCACAAGGTTAGCGGCAAACCCGCTAAAGTAGAATCTGGCGATGAAAATATTTGGTTTTCTTATCCAAATGGTATTTATGTTGCTGATAATCAAGGCAACCCACGATTAATTTCCCCAGGGAAAATGATTGGCGATGCTGTTCCTGTGGGAGTACCAAATGAACCAGGTCTATTTTATTATAATACATCAAACAAAAAGAATTATATTTCTACCGCAGAAAAATGGGTTGAAATTGGCACCGGCAGTATTCCAGGGACAGGTGGAGGCAGCAACATCGCTGGTAATGTTTTAATTAACGATACCGCCGATAATTATACCTCGGTAGATGTTGAAGGTGCCCTTGCAGAAATCGCCGAAAAATTCCCATGGTATTTTGGCAGAATGCAATTAAAAGATTTTAATGGTGACGTTAATACTCTATTAAAATCCACTGAAAATTATATTACAACTGGCGCCGCAAATCGCCCCAATGGCAAAACAGGTTGGCTCATCCAACGCAAGGCTTCTAATAACAATACTTATGGATTCGTCATTGGTGATGATGGCACCGCCCAAACAAGGATCAACGATAGGTTCACCCCACTAGCGGCCCAATCGGACCTTGCCAAACTACAAAATACTATTGATTCCTCTCTTGGGGAATTAAAGGTAAATGTAGGAAAGGGATTAGCTTCTGATGGAAGGACATTGGCAAATGGACAAACTATTTCATTATCGCAAGATATTTTAGATAAAATTGATGCCGCCGGAGCTGGAGCTAATTTTGTCAAAAAAGCTGGAGATACTATGACTGGTTCTCTAGTAATGAAAGCTGGTTCTGGACAGGTTTCTCAAGTACAATTTAGTAGTACAGGTTCTGCCAATAATGTGGCAATATTGGATGACCCAAGAGGAACGTCCAAGAATTCTCCTTATGGAGGAAAAGAAGGCGGTTCTCGTTTTAGAATTGCTAACGTGAGGAAGAATGTCGATATTATGTCGGCTTATAGCGATGGGTCGGTTGATATTCATGCACATGGTCCTCGTGCAGTATTTGGTAATGTAAGTACTAATGGACGAACTACTATTTTGAATAATAATAATAGTGGTGGGACTTCAGTTGATATTGTTGCGCCTTTCAGTGATGTTCCATTATTTGTTAAGGGTAAAAATGGACAACTGCATTATAAGGTCAATGGTGGAATGAATAGTTTGCTTTCTGGTAATAGTAGTAGTGGTCGTAAAAATTTACGTATTGCTGGTATGGGAAGTAATTCTGAATTAGCTACATTGTATTTTGAAGCATGGAATACAAGAGCTAAAGGTAAAATTCATTCTGGGTCAGCTATTAATGTTGGTTTTAACCATGAAACTTCTAAGGGTACTGGTGATGGGGATGTATGTTTACGTATCTTCCCAAGAAAAGCTGGGCTTAATGGTGAGAGAAATGCTTTGAGAAACTATGCTGTATTATATTATGAGCAATATAGTCAGACTTTAGTTGTTGACTCATTCAAGGGTAATGCAAACTTTACAAGCAATGAACGTAATAATTTTGTACGTTTGTCTTCTGATGGTTTTATTACACGTTCTTCTGTAAAATATAAGAATCCTATTAAGAAATTTGAAGAAGATGCTTTATCAAAAGTTAAAGAAGTTACACCTGAATTATATGCTTATAAAAATGATCCAAAACAAAGTACTCAATTAGGATTTATTATCGAGCATGGTCTTCCCCAAGAGGTAGTAGAAATGGAAGGGCGAGGCGTGAACGCTTATGCGCTGACAGCTTATTTATGGAGAGCGACACAACAACTGTCTCAAGAAGTAGATTCATTAAAAGAAGAATTAGAAAATTTAAGAAATAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b2a3f36aaed9881b7db26b93527f605795ad6938f0e31bc1225ba7189abfbac2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5948
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteriophage library of National Institute of Infectious Disease Japan Azam,A.H., Ojima,S. and Kiga,K. 2022-12-05 — GenBank