Protein

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Genbank accession
YP_009602278.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MQSNIVDEKDLYKPREVKSPKAEKAEQQTESDVKYTMFVSGLNYGGRNIEMKGKNFTNDLAIIFDQVENYSFKHSVDKTGFAVEDKSTLSDHAVIKDGVFSFTGRVNTSPHIIYEQNYIDRNTDSKNPAASMRPGAALEALTEIINKRQLVSLVTEERLLENYIITSLSASKSVGEGAAMVFDVELTEFRTFYLNKVVNATVYSNPKKVGKTQQKGAVNDCKNGSNVGNKRDTGAFADTASTNAAEEWQPYKSMMWTDENGVTQSAADWYYQEYGRPSTIVPSEQGNYDKVNGK
Physico‐chemical
properties
protein length:294 AA
molecular weight: 32809,07430 Da
isoelectric point:5,44844
aromaticity:0,09524
hydropathy:-0,66837

Domains

Domains [InterPro]
DC_0288
ATT
1–60
DC_0288 DC_1100
IPR048494
ATT
64–193
IPR048494
YP_009602278.1
1 294
Architecture
ATT
STR
ATT 1-193 | STR 194-276 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage V18
[NCBI] 		1981500 Uroviricota > Caudoviricetes > Vequintavirinae > Vequintavirus V18 >
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009602278.1 [NCBI]
Genbank nucleotide accession
NC_041937.1 [NCBI]
CDS location
range 41072 -> 41956
strand -
CDS
ATGCAAAGTAACATAGTTGATGAAAAAGACCTGTACAAGCCTCGAGAGGTTAAATCTCCAAAGGCTGAAAAGGCAGAGCAGCAAACCGAAAGCGATGTAAAGTACACTATGTTTGTCAGCGGTCTTAACTATGGCGGTCGCAACATAGAGATGAAGGGTAAAAACTTCACTAACGATCTTGCCATTATCTTCGATCAGGTTGAGAATTACTCTTTCAAACACTCTGTTGATAAGACGGGGTTTGCGGTGGAAGATAAATCTACCCTGTCAGACCACGCTGTGATTAAAGATGGTGTATTTTCTTTTACTGGTAGGGTAAATACATCCCCACATATAATCTATGAGCAAAACTACATCGATAGGAATACTGACTCTAAAAACCCTGCAGCATCTATGCGACCAGGTGCCGCACTGGAGGCTTTGACTGAGATCATTAATAAGCGACAGTTGGTTTCTTTGGTTACCGAGGAGAGACTTCTTGAGAACTACATCATAACCAGCCTTTCTGCCAGCAAGTCTGTTGGTGAAGGTGCTGCAATGGTGTTTGATGTAGAACTTACAGAGTTCCGCACATTCTACTTGAACAAGGTTGTTAATGCAACCGTATACAGCAACCCTAAGAAAGTAGGCAAGACCCAACAAAAAGGTGCTGTCAACGACTGTAAGAATGGTAGTAACGTAGGTAACAAGAGGGACACAGGGGCATTTGCAGACACTGCATCCACAAATGCTGCAGAGGAGTGGCAGCCATATAAATCTATGATGTGGACAGATGAAAACGGTGTTACCCAATCGGCTGCGGATTGGTATTATCAGGAATATGGAAGACCTTCTACCATAGTCCCATCTGAACAGGGAAACTACGACAAAGTTAACGGGAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e5fbbd3999b54173f4dd6a18e9cf262f67cfadab73fac3ea305901ae965004d9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6535
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteriophage strains, compositions and related methods Aleshkin,A.V. and Rubalsky,E.O. 2016-04-11 — GenBank