Protein

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Genbank accession
VFR10880.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MYTPPDEPVVVTSENSFALHPPALMLAENTFSLKPLVLGNPDTTDFLGLEDIHGAVDYSLQPCSVSSAGNYYWFPVLELVDKSTVTANHRMATLSGASWTNLGKSSPINSYWTLFCLLKDTLNTNVELAGSEFEMFNFLYNGTWDKRVRLPSAGKDPYVSGTPTAAPVNQGRIISFTGADNKRFYFLYTNGLVYGTDDNGKYPAATQGRVIYLPISPVASSISWNTSAGALPPVHSGAEGWYKFFYFGTTTIAELFTHSQLLNATIYPDSGPGPKTLLQGNTIAGYNCPAFTGSLTIRYTVPSGAIDASLPKPSASPQTLKLNISGLPAINDALGLTLVASDLQSPLFNFVPTVAIKDTVLTVRDAPGTGVQGNVTVYYDRINLATSGPTSVTLNQRNTKAVFTGYVNRDNPDLVVKLTPAIAALTRCGVPMLFYSKESALLVYDQRGVLPL
Physico‐chemical
properties
protein length:452 AA
molecular weight: 48677,59160 Da
isoelectric point:5,76031
aromaticity:0,10619
hydropathy:0,00000

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
VFR10880.1
1 452
Domain Start End Length (AA) Confidence
N-terminal 1 40 40 0,9615
Central domain 41 286 247 0,8295
C-terminal 287 452 165 0,5361
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-40
Central
41-286
C-terminal
287-452

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SPFM5
[NCBI] 		2528675 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
VFR10880.1 [NCBI]
Genbank nucleotide accession
LR535903 [NCBI]
CDS location
range 117752 -> 119110
strand +
CDS
ATGTATACGCCACCCGACGAACCGGTAGTTGTTACTTCAGAAAACAGTTTCGCACTGCATCCGCCTGCTTTAATGCTGGCAGAAAACACGTTTAGTCTCAAGCCGTTGGTGCTCGGTAATCCAGATACTACCGATTTCTTGGGTTTAGAAGATATCCATGGTGCGGTAGATTACAGTCTCCAACCGTGCAGCGTGTCCAGCGCAGGCAACTACTACTGGTTCCCGGTGCTAGAGTTGGTGGATAAGTCCACAGTTACCGCCAATCATCGCATGGCGACGTTGTCTGGAGCCAGTTGGACAAACTTAGGAAAATCATCGCCGATTAACAGTTACTGGACGCTGTTCTGTTTATTGAAAGATACACTGAACACCAACGTCGAGTTAGCAGGTAGTGAGTTTGAGATGTTCAACTTTCTGTATAATGGAACGTGGGACAAACGCGTTCGTCTACCTAGTGCCGGGAAAGACCCATACGTCAGCGGCACCCCAACTGCCGCTCCCGTTAACCAGGGACGCATCATTAGCTTTACAGGCGCAGACAACAAAAGGTTTTACTTCTTATATACAAACGGACTCGTTTACGGAACAGACGATAATGGTAAATACCCTGCGGCGACGCAGGGTAGGGTTATTTACCTCCCGATTAGTCCTGTCGCTAGCTCCATCTCCTGGAATACGTCGGCCGGTGCGTTACCACCGGTACATTCTGGTGCCGAAGGTTGGTACAAGTTCTTTTACTTCGGAACAACCACAATTGCAGAGTTGTTTACACACTCTCAACTTCTTAATGCCACTATATACCCCGATTCTGGACCTGGCCCTAAAACGTTGCTGCAAGGTAACACTATCGCGGGTTATAATTGCCCTGCGTTTACAGGCAGCTTAACGATACGTTATACCGTCCCGAGTGGTGCAATTGACGCAAGTTTACCTAAACCGAGCGCTTCGCCGCAGACGTTGAAATTAAATATCTCAGGTCTACCTGCAATAAACGACGCATTGGGGCTTACATTAGTTGCTTCTGATTTGCAGTCACCTTTATTTAATTTTGTGCCGACTGTGGCTATCAAAGATACAGTCTTAACGGTACGAGACGCGCCAGGGACAGGTGTACAAGGTAATGTTACCGTGTACTACGACCGGATTAACCTGGCCACTAGCGGCCCAACTTCAGTTACGTTAAACCAGCGTAACACCAAAGCTGTTTTCACCGGGTATGTCAATCGGGATAATCCTGATTTAGTTGTTAAGCTGACGCCGGCTATCGCTGCTTTAACCCGATGCGGAGTCCCTATGCTATTTTACTCGAAGGAGTCGGCACTGCTTGTATACGACCAACGTGGCGTACTACCACTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
601150a5ddf12f0a6365f37e9e79bcf478f2ef5252f6f8efdf6dabfb144fe622
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2465
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50