Protein

View in Explore
Genbank accession
ASR73862.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,87
TF
Evidence RBPdetect2
Probability 0,78
Protein sequence
MSSRADMIGSGPSSGHYQAGPTPTEEKSMPTYINDELLALGGIVNGILEGGAFPPQGKMPVRWREGMMMYFTEPLDDVYNVGQYKGQKIITSAGVWLYRRERWWKIIDDPSSITGAVFAYRLTADGTPPSTPSPSSAPPSGWSEVAPAKNDKSEWIWVTMSAAYDENTDTHTWSQPTPFSAGVEDGQDGADGQDGAPGLDGRIFEQWFREASVTPSVPSNVYPAPSPWSKTPPENPTLPVWMTFIKVREDGTDPVYPWSFPVKISGEDGQDGIDGKITKQFFKEAATQPQVPSNTYPPTGWSETTPNNPTLPVWMTWILVQEDGNLPQYPYSFPIKVTGKDGEQGEVGPIGPEGPPGQDGQDGADGTRGTLNVSKAISGSSWSNLEAYNAIVNDPNSDGVVRYWDTVTLFNSVNQFSEQRYYTGGTGSSSTWQPVELFVDGDAIINGTIAANKLVANTITAAQIAANAITANKIQAGAVTASKIASNTITANQIAAGTITGTEINSGTRITIGGTSGQDVVVLDASDSNSRIWVGNTTSTSANFRVTPTGDLYANNGYFGGEVTYQGITGAIGGAVDSSATSSTPDWSEWFVDNGSATPTATMARITVPRQNYDRVAVVTCIPSMLTATSRTNVDRFGIVWTAANSTGSTLSYHYRVSCVSESGSGYTTTGNTGAAFEFVAQNANQAWFKLTNTLAWEVFLPATTSTGNLVIDLKAEFLHATGQSFPVSNFVTFKVKDSTVNVQVSKINSGISIQN
Physico‐chemical
properties
protein length:756 AA
molecular weight: 80771,19700 Da
isoelectric point:4,57698
aromaticity:0,09788
hydropathy:-0,33810

Domains

Domains [InterPro]
DC_0595
STR
55–756
DC_0595
IPR057549
STR
270–470
IPR057549
G3DSA:1.20.5.320
STR
338–389
G3DSA:1.20.5.320
ASR73862.1
1 756
Architecture
STR
STR 55-756
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_ValP_IME271
[NCBI] 		2024229 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio alginolyticus
[NCBI] 		663 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ASR73862.1 [NCBI]
Genbank nucleotide accession
MF431726.1 [NCBI]
CDS location
range 31956 -> 34226
strand -
CDS
ATGTCAAGTAGAGCAGATATGATTGGTTCAGGTCCAAGCTCAGGTCACTACCAAGCTGGACCGACACCTACAGAAGAGAAGTCAATGCCAACATATATCAATGATGAACTCTTGGCGTTAGGTGGTATTGTTAACGGTATCTTGGAGGGTGGGGCATTCCCACCTCAAGGTAAGATGCCAGTACGTTGGCGTGAGGGTATGATGATGTACTTCACAGAGCCTCTAGACGACGTTTATAATGTAGGTCAATACAAAGGTCAGAAGATTATCACTTCAGCCGGTGTGTGGCTTTACAGACGCGAGAGATGGTGGAAAATCATTGATGACCCATCAAGTATTACAGGTGCAGTATTTGCTTACCGTCTTACTGCTGATGGTACACCTCCATCAACTCCATCACCATCATCTGCTCCACCAAGCGGTTGGTCTGAAGTAGCTCCTGCTAAGAATGACAAGTCTGAATGGATTTGGGTTACTATGTCAGCAGCTTATGATGAGAATACAGACACTCATACATGGTCTCAACCAACTCCATTTAGTGCAGGTGTTGAGGATGGACAAGATGGTGCAGACGGACAGGATGGTGCCCCAGGATTAGATGGTCGTATTTTTGAGCAGTGGTTTAGAGAAGCTTCTGTAACACCATCAGTACCTAGCAACGTTTATCCAGCTCCATCTCCTTGGTCTAAAACTCCACCAGAGAATCCTACTCTGCCTGTATGGATGACTTTTATCAAGGTTCGTGAGGATGGTACTGACCCTGTATATCCTTGGTCTTTCCCTGTTAAGATTTCAGGTGAAGATGGTCAAGATGGTATTGATGGTAAGATTACTAAACAGTTCTTTAAAGAGGCTGCTACACAACCACAAGTTCCTAGTAATACTTATCCACCTACAGGATGGTCAGAAACAACACCTAACAACCCAACACTACCAGTTTGGATGACGTGGATTCTGGTACAAGAGGATGGTAACTTACCTCAGTATCCTTATTCATTCCCTATTAAGGTAACTGGTAAGGATGGTGAACAAGGTGAGGTCGGTCCTATCGGTCCTGAAGGTCCACCGGGTCAAGATGGTCAAGATGGAGCAGATGGTACCCGTGGTACTCTTAATGTATCTAAGGCTATCTCAGGAAGCTCATGGAGCAATCTAGAGGCATACAATGCTATTGTCAATGACCCTAACTCTGATGGTGTAGTTCGTTACTGGGATACTGTTACATTGTTTAACTCTGTAAACCAGTTCTCAGAACAACGTTACTACACAGGAGGTACTGGTTCATCTAGTACATGGCAACCTGTAGAACTGTTTGTAGATGGTGATGCAATTATCAATGGTACAATCGCAGCTAATAAGTTGGTAGCTAACACTATCACTGCTGCTCAGATTGCTGCCAATGCTATCACTGCTAACAAGATTCAAGCAGGTGCAGTAACTGCTAGTAAGATTGCATCTAATACTATTACAGCTAACCAGATTGCAGCAGGTACGATTACAGGCACTGAGATTAACTCAGGGACACGAATCACTATTGGTGGTACATCAGGTCAAGATGTGGTCGTTCTAGACGCTAGCGACTCTAACAGCCGCATTTGGGTGGGTAATACAACATCAACCTCGGCTAACTTCCGAGTAACCCCTACTGGTGACTTATATGCTAACAATGGTTACTTTGGTGGTGAGGTTACTTACCAAGGTATTACAGGTGCAATTGGTGGTGCTGTAGATAGCTCAGCTACAAGTTCTACTCCTGACTGGTCTGAATGGTTTGTTGATAATGGTTCAGCTACCCCTACGGCTACTATGGCTCGTATTACTGTACCACGTCAGAACTATGACCGTGTGGCTGTTGTTACTTGTATTCCGTCAATGCTTACTGCTACATCACGTACAAACGTAGATAGGTTTGGTATCGTGTGGACTGCTGCTAATAGTACAGGCTCTACACTATCATACCATTACCGTGTATCGTGTGTATCAGAATCAGGCTCTGGTTATACAACAACTGGTAACACAGGTGCTGCATTTGAATTTGTAGCTCAGAATGCTAACCAAGCTTGGTTTAAGCTGACTAATACACTGGCATGGGAAGTATTCCTACCAGCCACTACATCAACAGGTAACCTTGTAATTGACCTTAAAGCAGAGTTCTTACATGCAACTGGTCAATCTTTCCCTGTATCTAACTTTGTAACCTTTAAAGTTAAAGATAGTACAGTGAATGTACAGGTTAGTAAAATTAACTCAGGTATCTCAATTCAAAATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
aa9427e04bc956fdcf8022e3eaa0db2a30f2d6d1af140f0ea635ce0cb01b1db9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6312
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic and biological characterization of Podoviridae bacteriophage vB_ValP_IME271 infecting Vibrio alginolyticus Li,F., Li,L., Sun,Q., Xing,S., Zhou,L. and Tong,Y.-G. 2019-01-09 — GenBank