Protein

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Genbank accession
YP_002261433.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAVKGYNFDRQIISPKMDAIVNGHSAAKAQGMIAPATLSISGLTVTLNQSTNRPIIGHLQGYYFEIENGTTLTIAPNTTGYIVVRADLTQVNTFSGVVTDGSYTVDTKQIQLQVVTKANIRKENLIWGGNVRDLVLYSFTSSATTVTVTPFNVNWVYPGGVFNPVKTWGANFSSDPSNAFRAQVVGGMLQFSGVIRNTKHVANGSTICQLNPEQSPDTSWAKGYVVAMQSSSLKGCQVYVAKDGRMSIQNQASSTVVAPLIMDGIAYPCLNNDNYFFPA
Physico‐chemical
properties
protein length:279 AA
molecular weight: 30095,77970 Da
isoelectric point:8,91200
aromaticity:0,09319
hydropathy:-0,02437

Domains

Domains [InterPro]
G3DSA:2.60.520.10
STR
2–157
G3DSA:2.60.520.10
DC_1902
RBD
127–278
DC_1902
YP_002261433.1
1 279
Architecture
STR
RBD
STR 2-157 | RBD 158-278 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_002261433.1
1 279
Domain Start End Length (AA) Confidence
N-terminal 1 137 137 0,9923
Central domain 138 268 132 0,0008
C-terminal 269 279 10 0,9970
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-137
Central
138-268
C-terminal
269-279

Taxonomy

  Name Taxonomy ID Lineage
Phage Listeria phage P40
[NCBI] 		560178 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Listeria
[NCBI] 		1637 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_002261433.1 [NCBI]
Genbank nucleotide accession
NC_011308 [NCBI]
CDS location
range 14486 -> 15325
strand +
CDS
ATGGCAGTTAAAGGTTATAATTTTGACAGACAAATCATATCACCAAAAATGGACGCTATTGTCAACGGTCACAGCGCCGCGAAAGCCCAAGGAATGATTGCACCCGCAACATTATCTATCAGCGGATTAACTGTAACGCTAAATCAGTCCACCAATAGACCTATTATTGGACATTTGCAAGGTTATTATTTTGAGATTGAGAATGGTACTACGTTGACAATCGCACCCAATACCACGGGGTATATTGTAGTTCGGGCTGATTTAACACAAGTAAATACTTTTTCGGGTGTGGTGACGGATGGTAGCTATACAGTGGACACCAAACAGATTCAGTTACAGGTTGTAACCAAGGCTAATATCAGAAAGGAAAATTTGATTTGGGGCGGTAATGTTCGTGATTTAGTACTATATTCATTCACATCGAGTGCTACGACAGTTACGGTTACCCCCTTTAACGTTAACTGGGTTTATCCCGGAGGAGTATTTAATCCCGTAAAAACATGGGGTGCTAACTTTTCATCTGACCCATCAAACGCATTCCGCGCGCAGGTAGTAGGTGGAATGTTGCAATTTTCTGGTGTAATTCGGAATACGAAACATGTGGCAAACGGGTCTACGATTTGCCAATTGAACCCGGAACAGTCACCTGATACAAGCTGGGCAAAGGGCTATGTTGTAGCTATGCAATCCAGTTCTTTGAAAGGTTGTCAGGTGTATGTGGCTAAAGATGGTAGAATGAGTATTCAAAATCAAGCTTCCAGTACCGTAGTAGCACCGCTCATTATGGATGGTATCGCATATCCTTGCCTAAACAACGATAATTATTTTTTCCCAGCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
a0981c2c99ed08e8a6d0f4373688c8bf233a477d45f39a0a390587f561dc9cc3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7741
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50