Protein

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Genbank accession
YP_009284925.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,82
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTNIKARKGGSSQPRTPVEMPDNLISKDKIKLLLAVSDGEVVDDFSLKQLHFGGVPVQNEDGSYNYEGVIAEFRPGTQTQSYIQGFSESSAEFQVARDVTFNTPYTLTVSNKNLSAIRFRLLWPRVLTQKDNGDMVGSVVEYKIEMAVDGASYQTYLTDKIDGKNTTGGYDRSIRVNLPQDFTSQVLIRVSRITPDADGVKVVDAFQVQSYAEVIDAKFRYPLTAMLYVEFDSDLFQNQIPTISLKKKWKIVQVPSNYDPVNRTYAGTWDGTFKWAWSNNPAWVLYDLIMNQRYGLDQRELGIPVDKWSLYEVSQYCDELVPDNRGGMEPRYLMDMVVQSQVEAFQLVRDVCSAFRGMTFYNGESLSIIVDKPRDPVYLFTADNVVDGVFVRTFPSEKTMYTSCNVMFDDAENQYEQDVEPVFNADAAMRFGHNPTSITAIGCTRRTEANRRGRWILQTNLSATTVSFSTGLEGMIPSCGDVIYVADPHWQSAFNLVLSGRIMEVTGTQVFLAFRCDAKAGDTLILNTDDGKPLRRTIASVSADGKTITLNVGYNFDVAPDSVFLIESDQLVAEQYVVTRIEKGSDDDEFTFAITATQYNPNKYDAIDNGVITDDRPTSVVDPDSMGAPENVSISSFSRIVQGMSVETMVIGWSAVQYAKLYEVQWRKDGGNWNNVPRTATTQVDIEGIYAGEYQARVRCISGGNIASPWSALATATLTGKVGAPKGPINLFASDNEIFGIRVKWAMPEGAEDTAYIELYQSQSGTDQDASLLTLIPYPASEYWHSILPAGYVNFYKARSVDRIGNVSAWTDYARGMSSTDVNAITDTILDEILDSDAMKELQVSAQDSAAKLNDYANSIIQNALANDGDVRIMRKENGKRKAEIKRAEVLIANETEARVQQVNQISAEFNENLNSGLTQVNEALANETEARVTSEEALSARIGQNSAALDQKLDSWANVNGVGSMYTMKLGLTYNGQEYNSGMALQLTSQGGNVVSQVLFIADRFAIIRNAESGAYTLPFVVQNDQVFMNNALIQDGSITNAKIGNVIQSSNYIAGQQGWVINKNGGSEFNNVTVRGHIEANSGTFKGTIEAQSFIGDIAVARRYDDLSFRRNNTVQRDGYYQNRGYGMTIVLSCTLIYEVTGGEDDRNGYIVEITFNIGGQQVTRLFPVNPRLTSGTYAAEFRFSADIPANYSNTSFFVKAKGRGANWDYSCQIENITATAFRTNSNSFT
Physico‐chemical
properties
protein length:1232 AA
molecular weight: 136499,85850 Da
isoelectric point:4,76307
aromaticity:0,09984
hydropathy:-0,30641

Domains

Domains [InterPro]
DC_0014
STR
1–1232
DC_0014
IPR053171
Unmapped
3–875
IPR053171 Coil IPR015406
IPR055385
ATT
90–217
IPR055385 IPR032876 IPR013783
IPR036116
STR
627–716
IPR036116
IPR003961
STR
628–722
IPR003961
YP_009284925.1
1 1232
Architecture
STR
ATT
STR
ATT
STR
STR 1-89 | ATT 90-217 | STR 218-340 | ATT 341-489 | STR 490-1232
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009284925.1
1 1232
Domain Start End Length (AA) Confidence
N-terminal 1 500 500 0,8809
Central domain 501 1051 552 0,0643
C-terminal 1052 1232 180 0,7622
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-500
Central
501-1051
C-terminal
1052-1232

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage PKP126
[NCBI] 		1654927 Uroviricota > Caudoviricetes > Drexlerviridae > Webervirus PKP126 >
Host Klebsiella pneumoniae KCTC 2242
[NCBI] 		1049565 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Klebsiella > Klebsiella pneumoniae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009284925.1 [NCBI]
Genbank nucleotide accession
NC_031053 [NCBI]
CDS location
range 34700 -> 38398
strand -
CDS
ATGACTAATATCAAGGCCCGCAAGGGCGGTTCCAGCCAGCCGCGAACCCCGGTAGAAATGCCTGATAACCTGATCTCGAAAGACAAGATCAAGTTATTGCTGGCCGTTTCTGACGGTGAAGTAGTGGATGACTTCAGCCTGAAGCAGTTGCATTTCGGCGGCGTTCCGGTTCAGAACGAAGACGGGAGCTATAACTATGAGGGAGTTATTGCAGAATTTCGCCCCGGCACGCAAACGCAGAGTTACATCCAGGGATTCAGTGAATCAAGCGCTGAATTCCAGGTTGCACGCGACGTTACCTTTAACACGCCGTACACGCTGACGGTATCGAACAAGAATCTTTCTGCTATCCGCTTCCGCCTGTTATGGCCCCGCGTGCTGACGCAAAAAGATAATGGCGATATGGTCGGTTCTGTCGTTGAGTACAAGATCGAAATGGCGGTTGACGGTGCGAGCTATCAAACCTACTTGACCGACAAAATCGACGGTAAAAACACGACTGGCGGTTACGATCGCAGTATCCGCGTCAACTTGCCGCAAGACTTCACGTCGCAGGTTCTTATCCGCGTAAGCCGAATTACGCCGGACGCTGACGGGGTGAAGGTGGTCGATGCCTTCCAGGTTCAGTCCTACGCTGAGGTGATCGATGCAAAATTCCGCTATCCGCTGACGGCAATGCTTTACGTCGAGTTTGATAGCGATCTGTTCCAGAACCAGATCCCGACAATCTCGCTCAAGAAGAAGTGGAAGATTGTCCAGGTTCCGAGTAACTATGACCCTGTTAACAGGACGTATGCCGGAACGTGGGACGGAACTTTCAAATGGGCGTGGAGCAACAACCCGGCTTGGGTTCTTTACGACCTGATCATGAATCAGCGTTATGGGTTAGACCAGCGCGAGTTAGGGATCCCGGTCGACAAGTGGTCGCTCTATGAGGTGTCGCAATACTGTGATGAGCTTGTGCCGGATAATCGCGGCGGGATGGAACCGCGTTACCTGATGGATATGGTTGTGCAGTCGCAGGTCGAAGCCTTCCAGTTGGTCAGGGATGTTTGTTCCGCCTTCCGTGGAATGACGTTCTACAACGGGGAAAGCCTTTCGATTATCGTCGATAAGCCACGCGATCCGGTTTACCTGTTCACTGCTGATAACGTCGTTGATGGCGTATTCGTTCGAACTTTTCCGAGCGAAAAAACGATGTACACGTCGTGCAACGTGATGTTCGACGACGCAGAGAACCAGTACGAACAGGACGTTGAACCAGTATTCAACGCTGACGCTGCAATGCGGTTCGGTCACAACCCGACAAGCATCACGGCAATCGGTTGCACCAGACGGACAGAAGCAAACCGCCGTGGGCGCTGGATTCTGCAAACGAACCTAAGCGCAACCACCGTTTCGTTTTCTACTGGCCTGGAAGGCATGATCCCGTCATGTGGCGATGTGATTTACGTTGCAGATCCGCATTGGCAATCGGCCTTCAACCTGGTGTTGTCAGGTCGCATTATGGAAGTAACTGGAACTCAGGTTTTCCTGGCTTTCCGCTGCGACGCGAAGGCGGGCGATACGCTGATTCTGAACACTGACGACGGCAAGCCATTACGCCGAACCATTGCCAGCGTTTCGGCAGACGGCAAAACCATTACGCTAAACGTTGGATATAACTTTGACGTTGCGCCTGATAGTGTATTCCTGATCGAAAGTGATCAGCTTGTAGCGGAACAGTATGTAGTAACTAGGATTGAGAAGGGGAGCGATGACGACGAATTTACTTTCGCCATCACAGCTACCCAATACAACCCGAACAAGTACGACGCGATCGACAACGGAGTAATCACTGACGACCGCCCAACGTCGGTTGTTGACCCGGATTCAATGGGAGCGCCGGAAAACGTGTCGATTAGTTCATTCTCACGCATTGTGCAGGGTATGAGCGTCGAGACGATGGTGATCGGCTGGTCTGCCGTGCAGTACGCAAAACTTTACGAGGTGCAATGGCGTAAGGATGGCGGAAACTGGAACAACGTGCCGCGCACAGCGACAACGCAGGTTGATATTGAGGGGATTTATGCTGGCGAATACCAGGCGCGCGTAAGGTGCATTAGCGGCGGCAATATCGCGTCTCCTTGGTCTGCATTGGCAACCGCCACACTGACCGGGAAAGTCGGAGCGCCAAAAGGCCCGATTAACCTTTTTGCGTCGGACAATGAGATCTTCGGCATTCGCGTTAAGTGGGCCATGCCGGAAGGAGCGGAAGATACGGCATACATTGAACTTTACCAGTCACAAAGCGGAACCGATCAGGATGCAAGCCTGCTTACCCTGATTCCCTACCCGGCTTCTGAATACTGGCATTCAATTCTTCCCGCTGGCTACGTGAACTTCTACAAAGCCAGAAGCGTAGACCGTATCGGCAACGTTTCAGCGTGGACTGATTACGCTCGCGGCATGTCGTCTACTGACGTTAACGCCATCACGGATACGATCCTGGATGAGATCCTCGACAGCGACGCGATGAAAGAACTTCAGGTGAGTGCACAGGATAGTGCGGCAAAACTCAATGACTACGCTAACAGCATCATCCAAAACGCATTAGCGAATGATGGAGATGTTAGAATCATGAGAAAGGAGAATGGAAAGAGGAAGGCTGAGATTAAACGCGCAGAAGTTCTCATAGCAAATGAGACGGAAGCCAGGGTGCAGCAGGTTAACCAGATATCGGCAGAGTTCAACGAAAACCTCAATTCTGGATTAACTCAAGTTAACGAGGCGTTGGCGAATGAAACTGAGGCTCGCGTTACGTCGGAGGAGGCGCTATCAGCAAGGATTGGCCAGAACTCCGCAGCGCTAGATCAGAAACTTGATTCGTGGGCAAACGTTAATGGAGTTGGTTCCATGTATACAATGAAGCTAGGGCTGACTTACAACGGCCAGGAATACAATTCCGGGATGGCCCTACAGCTTACATCACAGGGTGGAAACGTTGTTTCGCAAGTTCTGTTTATTGCTGATAGATTCGCCATCATCCGAAATGCTGAGTCTGGAGCGTACACGTTGCCTTTTGTTGTGCAGAATGACCAGGTTTTCATGAATAACGCGCTTATTCAGGACGGTTCGATTACCAACGCGAAGATCGGTAACGTCATTCAGTCCAGCAACTACATCGCTGGGCAGCAAGGATGGGTGATTAACAAGAACGGCGGTTCTGAGTTTAATAACGTTACCGTTCGCGGCCATATCGAGGCTAATAGCGGAACGTTCAAGGGTACGATTGAGGCTCAGAGCTTCATAGGTGATATTGCAGTTGCCAGAAGATATGATGACTTGAGCTTTCGCAGAAACAATACCGTCCAGCGTGACGGGTACTATCAAAATCGCGGTTATGGAATGACGATAGTTCTTAGTTGCACATTAATCTATGAGGTTACAGGGGGTGAAGACGATAGAAACGGATATATTGTTGAAATTACGTTCAATATTGGAGGGCAGCAGGTAACTAGACTTTTTCCAGTTAACCCAAGGCTAACATCAGGTACTTATGCTGCTGAATTTCGATTTTCTGCTGATATTCCAGCAAATTACAGTAACACTTCTTTCTTTGTGAAAGCGAAAGGAAGAGGCGCAAATTGGGATTATAGTTGTCAAATTGAGAACATCACGGCAACCGCATTCCGCACAAACTCAAATAGCTTTACATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0b29906eab2baef9b89cadb5d895925a852ce7ec24ca91662e6d78d718d32ad9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7631
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of K. pneumoniae Bacteriophage PKP126 Lee,J.-H., Park,E.-A. and Lee,D.-H. 2012-05 — GenBank