Protein

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Genbank accession

XBM95056.1 [GenBank]

Protein name

tail fiber protein

RBP type

Evidence Phold

Probability 1,00

Evidence RBPdetect2

Probability 0,55

Protein sequence

MGLSVVPPPEVSGLTGATGPQGMKGDTGATGPAGPTGATGATGPTGSTGAQGPIGPTGATGSTGSPGLVWKNAWVASTAYVVNDAVTYNGSSYRVTTAHTSSAGAPPDTLVNYQLLAQKGATGATGPTGATGPTGATGAQGPKGDPGAVTAVNGKSGDVTLAASDVNAMPTTGGKFTGDFSLEGAAGSYRQFSFDVGGVKRWTFQKDDVAEDGAGNGGNLRISSRNDDGTFKSTVVYADRGTGQVAVGTTLPTGSSKLTVAGSAALKDVSTAPAATSGTAIFYSEAGVGKVRQGDGTIQVIGDKTLTPVQSLGLMARSHISGGGNIYWDNMNLSWSKRFLVAFGNGKGTGLSTGGYFEMTMPPNGTVIPVVGSTSGTTSVTVANGRIPLRSIAWGSLWYKVPYGGAATTVPGNYVITDYTGNQAPFGEDYVLVAQVNLDGAGSPSLKLGTGEFLDHWRPFAYKNSWTSYSAGTEGVYPEPQVADGATPLYRGAAYRMGAGRMVEFKGLIKGGTATSGYDIATMPVGYRPFANHIFYLPNNAALMRVDIYAAGGYVTVGAPGIGTINNGWVDLSTVRYPAEQ

Physico‐chemical properties

protein length:	581 AA
molecular weight:	58792,62440 Da
isoelectric point:	7,72694
aromaticity:	0,08778
hydropathy:	-0,14423

Domains

Domains [InterPro]

DC_1365
STR
2–70

DC_1365 DC_1175

IPR008160
STR
12–67

IPR008160 G3DSA:2.10.10.20 G3DSA:1.20.5.320

IPR050149
Unmapped
13–149

IPR050149

IPR036573
STR
73–109

IPR036573

cd12214
CBM
73–109

cd12214

IPR003610
CBM
73–105

IPR003610

XBM95056.1

1 581

Architecture

STR

ATT

STR

STR 2-72 | ATT 73-113 | STR 114-581

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_1365	STR	DC_1365	2	70	Novel HMM	DC_1365	Central	Low	Positional only	2 proteins / 2 hits
IPR008160	STR	DC_0536	12	67	InterPro cluster	Collagen triple helix repeat	C-terminal	High	Text match	355 proteins / 386 hits
IPR050149	Unmapped	-	13	149	InterPro	Collagen superfamily	-	-	-	-
DC_1175	STR	DC_1175	70	581	Novel HMM	DC_1175	Central	Low	Positional only	105 proteins / 105 hits
G3DSA:2.10.10.20	ATT	G3DSA:2.10.10.20	73	113	Merged direct domain	G3DSA:2.10.10.20	N-terminal	Low	Positional only	19 proteins / 19 hits
IPR036573	STR	IPR036573	73	109	Merged direct domain	Carbohydrate-binding module superfamily 5/12	Central	Low	Positional only	2 proteins / 2 hits
cd12214	CBM	DC_0028	73	109	InterPro cluster	ChiA1_BD	C-terminal	High	Text match	29 proteins / 44 hits
IPR003610	CBM	DC_0028	73	105	InterPro cluster	Carbohydrate binding module family 5/12	C-terminal	High	Text match	29 proteins / 44 hits
G3DSA:1.20.5.320	STR	G3DSA:1.20.5.320	120	169	Merged direct domain	G3DSA:1.20.5.320	Central	Low	Positional only	67 proteins / 67 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Streptomyces phage Kamino [NCBI]	3158857	No lineage information
Host	Streptomyces kasugaensis [NCBI]	1946	cellular organisms > Bacteria > Bacillati > Actinomycetota > Actinomycetes > Kitasatosporales

Coding sequence (CDS)

Genbank protein accession

XBM95056.1 [NCBI]

Genbank nucleotide accession

PP750867.1 [NCBI]

CDS location

range 17653 -> 19398
strand +

CDS

ATGGGTCTGTCTGTTGTTCCACCTCCAGAGGTGTCCGGCCTCACTGGTGCCACTGGCCCGCAGGGCATGAAGGGTGACACTGGAGCTACTGGCCCGGCTGGACCGACTGGCGCTACGGGTGCGACTGGTCCTACCGGGTCTACCGGCGCTCAGGGCCCGATCGGTCCCACGGGAGCCACCGGTTCCACCGGTTCGCCCGGCCTGGTCTGGAAGAACGCCTGGGTCGCCTCGACTGCCTACGTCGTCAACGACGCGGTCACGTACAACGGCTCCAGCTACCGCGTCACCACGGCGCACACGTCGTCCGCTGGCGCTCCTCCGGACACGCTGGTGAACTACCAGCTTCTCGCCCAGAAGGGCGCTACCGGCGCGACCGGTCCCACTGGAGCCACCGGCCCCACGGGTGCCACTGGCGCGCAAGGTCCGAAGGGTGACCCCGGAGCCGTCACTGCCGTCAACGGCAAGTCTGGCGACGTGACCCTCGCGGCGAGTGACGTGAACGCCATGCCCACTACGGGCGGCAAGTTCACTGGCGACTTCAGCCTCGAAGGCGCGGCGGGTTCCTACCGGCAGTTCAGCTTCGACGTCGGCGGCGTGAAGCGATGGACATTCCAGAAGGACGATGTCGCTGAGGACGGCGCTGGCAACGGCGGCAACCTCCGGATCTCCTCGCGCAACGACGACGGCACCTTCAAGTCGACCGTCGTGTACGCGGATCGAGGGACCGGTCAGGTTGCCGTTGGCACCACCCTCCCGACCGGGTCGTCCAAGCTGACGGTCGCTGGCTCGGCGGCACTGAAGGACGTGAGCACTGCGCCTGCGGCCACCTCCGGGACCGCGATCTTCTACTCCGAGGCTGGGGTCGGCAAGGTCCGGCAAGGGGATGGCACGATCCAGGTGATCGGCGACAAGACGCTCACCCCGGTTCAGAGCCTGGGCCTCATGGCCCGAAGCCACATCAGTGGTGGCGGGAACATCTACTGGGACAACATGAACCTGTCCTGGAGCAAGCGGTTCCTGGTCGCCTTCGGCAACGGCAAGGGTACGGGCCTCTCGACGGGCGGCTACTTCGAGATGACGATGCCTCCCAACGGCACGGTCATCCCGGTCGTCGGTAGCACCTCGGGCACCACCTCGGTCACGGTCGCCAACGGTCGCATCCCGCTCCGCTCGATCGCATGGGGCTCACTCTGGTACAAGGTCCCCTACGGCGGGGCCGCGACCACGGTGCCCGGCAACTACGTGATCACCGACTACACCGGCAACCAGGCCCCGTTCGGCGAGGACTACGTTCTGGTCGCACAGGTCAACCTTGATGGCGCTGGCAGCCCTTCACTGAAGCTGGGGACCGGCGAGTTCCTGGATCACTGGAGGCCGTTCGCCTACAAGAACTCCTGGACCTCGTACTCCGCTGGCACTGAAGGCGTCTACCCCGAGCCCCAGGTCGCGGACGGCGCGACGCCTCTCTACCGAGGTGCTGCCTACCGCATGGGCGCTGGCCGCATGGTCGAGTTCAAGGGCCTGATCAAGGGCGGCACTGCCACCAGCGGCTACGACATCGCGACCATGCCGGTCGGCTACCGCCCCTTCGCCAACCACATCTTCTACCTGCCGAACAACGCGGCCCTGATGCGCGTGGACATCTACGCCGCTGGTGGCTACGTCACTGTCGGAGCTCCCGGCATCGGCACCATCAACAACGGTTGGGTCGACCTCTCCACGGTCCGCTACCCCGCCGAGCAGTGA

Genome Context

Tertiary structure

PDB ID

d1c54020b6c6fcfd2d34497dc92cef380f49910c8e1673d59b9dd83ee087e8a2

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,6433

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Literature

Title	Authors	Date	PMID	Source
Isolation and characterization of the new Streptomyces phages Kamino, Geonosis, Abafar and Scarif infecting a broad range of host species	Rackow,B., Rolland,C., Mohnen,I., Wittmann,J., Muesken,M., Overmann,J. and Frunzke,J.	—	—	GenBank

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence

Literature