Protein

View in Explore
Genbank accession
QMV28723.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MANKVYKNGMVHDTIPSIYKNNWHRSVPWVFSNGAWHRAYDLGDENLLANSRMLNGTDIFCYSDGVVIGNVPPCYTVYNNSTNTGNNAFAISFNQDNENTKGYTFRTIDSRMFFQTRISLKAGKTYTASVMVKNNDLTLVHSGVLADIYMDNGDPIDNYLTFKTKFDNNPLIGDERTRIYSTFTAKKDCLIQFNFGVGVRYNTNGDFSFDSPMVTNTNILIDYQPTPHVLTNEAIILNRDAGFSTTGSLMVANKTHKVSGGLVIGDIATELVIASKNVGGISTGMGINLETNTFWVKTPDGVYHTKPLKRPLPRNNSIGVSVWFDVSNGFAQNIRLYVNGEVYARITDPYLSLDTGLNTVFGLNSNNITIEQFEIYMDGNSHLFNISNQGNGKLVSTDGKLVLDIVGDTIWWSTVAPKITKQPQVIYNAQVGDTVVIESDCDRFSTVQWKTSRGVEVGNSKNLEIEVTPTLDTSIFYYAIYKNSYGQVTTRSTRIQIS
Physico‐chemical
properties
protein length:498 AA
molecular weight: 55457,65380 Da
isoelectric point:6,25629
aromaticity:0,10843
hydropathy:-0,25984

Domains

Domains [InterPro]
DC_1300
ATT
1–44
DC_1300 G3DSA:2.60.120.260
G3DSA:2.60.120.260
STR
45–230
G3DSA:2.60.120.260
DC_0441
STR
214–498
DC_0441
QMV28723.1
1 498
Architecture
ATT
STR
ATT 1-44 | STR 45-498
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QMV28723.1
1 498
Domain Start End Length (AA) Confidence
N-terminal 1 230 230 0,0488
Central domain 231 429 200 0,2200
C-terminal 430 498 68 0,6934
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-230
Central
231-429
C-terminal
430-498

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage AP1
[NCBI] 		2759193 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Aeromonas hydrophila
[NCBI] 		644 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QMV28723.1 [NCBI]
Genbank nucleotide accession
MT713136 [NCBI]
CDS location
range 3173 -> 4669
strand -
CDS
ATGGCTAACAAAGTGTATAAAAATGGGATGGTGCATGACACCATCCCATCCATTTATAAAAATAACTGGCATAGGTCCGTACCGTGGGTTTTTTCTAATGGGGCATGGCATAGAGCTTATGACCTTGGCGACGAAAACCTATTAGCAAATAGTCGAATGTTGAATGGTACTGATATTTTTTGTTATTCTGACGGGGTTGTTATTGGAAACGTTCCACCATGCTATACCGTTTATAATAACTCGACAAATACGGGAAATAACGCTTTTGCTATAAGCTTCAACCAAGATAATGAAAATACGAAAGGATATACATTCAGAACTATTGATAGTCGAATGTTCTTCCAAACCCGTATTTCGTTAAAGGCTGGAAAAACTTATACCGCAAGCGTTATGGTTAAAAACAACGATCTTACGTTGGTTCATAGTGGTGTACTTGCTGATATATACATGGACAATGGTGACCCCATTGATAATTATCTAACATTTAAAACTAAATTTGATAATAATCCATTAATTGGTGATGAGAGAACCCGTATATACTCTACTTTCACCGCAAAGAAAGACTGTCTAATACAATTTAACTTTGGTGTTGGAGTTAGATATAACACAAATGGTGATTTCTCTTTTGATTCACCTATGGTTACAAATACAAATATCCTGATCGATTATCAACCAACCCCCCACGTTTTAACCAACGAAGCAATTATTTTAAATAGAGACGCTGGATTCTCTACCACTGGTTCTTTGATGGTTGCGAACAAGACACATAAAGTTTCTGGTGGCCTTGTTATTGGTGATATCGCTACAGAACTAGTGATAGCTTCAAAAAACGTTGGTGGTATTTCTACTGGTATGGGCATAAATCTAGAAACTAACACATTCTGGGTTAAAACTCCTGATGGTGTTTATCACACCAAACCATTGAAAAGACCATTACCAAGAAATAACAGTATTGGTGTATCTGTTTGGTTTGATGTATCTAACGGATTTGCCCAAAACATAAGGTTGTATGTAAACGGTGAAGTATACGCAAGAATAACAGACCCATATCTTAGTCTTGATACAGGGCTTAATACTGTATTCGGGTTAAATAGTAATAACATCACCATTGAACAATTTGAAATTTACATGGATGGAAACAGTCATCTATTTAATATTTCAAATCAAGGTAATGGAAAATTGGTATCTACTGATGGAAAACTGGTTCTTGATATCGTCGGTGATACAATTTGGTGGAGTACGGTTGCGCCTAAAATAACGAAACAACCGCAAGTTATATATAACGCGCAAGTTGGTGATACGGTCGTGATAGAATCGGATTGTGATAGATTTTCCACAGTTCAATGGAAAACCTCAAGGGGTGTTGAAGTAGGTAATTCTAAAAATCTAGAGATAGAAGTTACCCCAACCCTCGACACATCAATTTTCTATTACGCCATTTATAAGAACAGTTATGGTCAAGTAACCACTCGCTCAACTAGGATCCAAATATCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d30a911272ccbf419659ded6a4b52ff560a2687301ff56b31e3bfeb7e3ebb858
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6748
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Aeromonas hydrophila phage AP1 Baliga,P., Puneeth,T.G., Shekar,M. and Girisha,S.K. 2022-01-07 — GenBank