Protein

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Genbank accession
QQO38351.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MAITPNQLGVFKPKFNNDASTNGGIATLNQLSSGVRNSIFSDLANDSSLAGATEVRKVFIKQNLQVLDASAYGDASVFMKDIGDSDINFLLGYGTETDSGVNPTLDIMVGRVVNVGASYVDIETPLVKTGVITVTRFRPSTGSVVEVADASANASGNYCRLTNVQTSSFSVGDVITEKKVFELPLPDDKANLKPRVRDLSVSSAGTFNVSAVSFAPRAAVTGVVNLELISGSSYSWNIPDLNLNGVASLDEDLSVYHPETSAQTNAALVLKIPSSAFEGVWASGNTVNFTIVSGSIPLWLKRVVSDNPNVAGTQAVNFGVKYQTS
Physico‐chemical
properties
protein length:325 AA
molecular weight: 34240,95210 Da
isoelectric point:4,80837
aromaticity:0,07385
hydropathy:0,05692

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_VpaS_VP-RY-9
[NCBI] 		2801537 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QQO38351.1 [NCBI]
Genbank nucleotide accession
MW411580.1 [NCBI]
CDS location
range 76303 -> 77280
strand +
CDS
ATGGCAATCACACCGAATCAATTAGGCGTTTTTAAACCTAAATTTAATAACGATGCTAGTACAAACGGGGGCATAGCCACACTAAACCAATTATCTAGCGGTGTGCGAAATTCTATTTTTTCGGATCTTGCTAACGATAGTTCACTTGCAGGGGCTACCGAAGTTAGGAAGGTTTTCATTAAGCAAAATTTACAGGTTCTCGACGCCTCCGCGTATGGTGACGCGTCTGTTTTCATGAAGGACATAGGCGATAGCGATATTAATTTTTTATTGGGGTACGGGACGGAGACAGATAGCGGGGTTAACCCAACACTTGACATTATGGTCGGGCGCGTCGTTAACGTTGGCGCGTCATACGTTGACATTGAAACCCCGCTTGTAAAAACAGGAGTAATTACGGTTACACGTTTCCGACCTAGCACCGGATCAGTGGTCGAGGTGGCAGACGCTAGCGCGAACGCCTCCGGCAACTATTGCCGTTTAACCAACGTGCAGACTAGCTCGTTTAGCGTGGGGGACGTTATCACCGAAAAGAAAGTTTTCGAACTTCCTTTACCCGATGATAAAGCGAACCTTAAACCAAGAGTACGAGATCTTAGCGTTAGTTCAGCGGGTACATTCAATGTAAGTGCGGTCAGCTTTGCTCCGCGCGCCGCTGTAACTGGCGTTGTTAACCTAGAGTTAATCAGCGGTTCGTCATATAGCTGGAATATACCCGACCTAAACCTTAACGGCGTGGCGTCACTAGATGAAGATCTTAGCGTTTACCACCCTGAAACGAGTGCACAAACTAACGCAGCCCTAGTGTTAAAGATCCCGTCTTCAGCTTTTGAGGGTGTTTGGGCTTCAGGGAATACCGTAAATTTTACGATAGTCTCCGGCTCAATCCCTTTATGGTTAAAACGTGTTGTTTCCGATAACCCTAACGTGGCGGGAACACAGGCGGTTAACTTCGGAGTTAAGTATCAAACTAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ee2f0687b852f4b0d13666edc4e894e9490322aef770c0834e794ab39e73d696
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2946
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome analysis of the novel Vibrio parahaemolyticus phage vB_VpaS_VP-RY-9 Ren,Y. 2021-04-02 — GenBank