Protein

View in Explore
Genbank accession
XRR08424.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MQSINQPQKILVPFAQNDSAKVEIPVTTTSPGRFSQTLGSPPETALPPESGGTPPQLPDFNGAMNQQSRLAWWMMAGGRFAFDATWANNTYVNGYPRGAVLPAAIGAGLIGMGEWYNNAEANTADPDVNGAGWVPGYHYGVTALTGQTGGTLTLSPALAAKRTLTIAGTLTSNLVVVLPTWVYTWRIVNNTGGAYTVTVKNAATTGGVIPQNGVSTTVHCDGTQVSFDSPNIPAAVLSTQPMQLGQATGRLLAVRRFAVAGATTYTPTTGTNTVIVEVVGAGASGAGTVAALSGQAAAGGGGGGGAYAKARIVSGFAGVTITVGAPGVSAAPGNAGQAGGASSFGSLVVCPGGAGGPQGQGSSSANYSAPGLGAAAPTFGGSADVIMAASGAAGSPGLLFSSSIVISGNGANTPYGSGGGGAGSSTAGQTGTGLSAGGQGSGGGGGYSTSGGSPGSGGSGGGGLVLVWEYA
Physico‐chemical
properties
protein length:471 AA
molecular weight: 45395,74960 Da
isoelectric point:6,71919
aromaticity:0,06794
hydropathy:0,10000

Domains

Domains [InterPro]
DC_1179
STR
1–435
DC_1179
IPR049304
STR
260–467
IPR049304
XRR08424.1
1 471
Architecture
STR
STR 1-467 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage vB_XORNC02
[NCBI] 		3416405 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Xanthomonas oryzae
[NCBI] 		347 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XRR08424.1 [NCBI]
Genbank nucleotide accession
PV506377.1 [NCBI]
CDS location
range 36793 -> 38208
strand +
CDS
ATGCAATCGATCAATCAGCCGCAAAAAATCCTCGTACCCTTCGCGCAAAACGATAGCGCGAAGGTCGAGATTCCGGTGACAACCACGAGCCCGGGGCGTTTTTCTCAGACCTTAGGTTCGCCGCCAGAGACTGCGCTGCCGCCCGAGTCGGGCGGTACCCCTCCTCAGCTGCCGGATTTTAACGGCGCGATGAATCAACAGTCGCGCCTTGCGTGGTGGATGATGGCCGGCGGTCGTTTTGCGTTCGACGCGACCTGGGCCAACAACACCTACGTCAACGGCTATCCGCGTGGTGCGGTGCTACCCGCCGCAATCGGCGCCGGTCTGATCGGCATGGGCGAGTGGTACAACAACGCCGAAGCTAACACGGCCGACCCGGACGTCAACGGCGCAGGTTGGGTGCCGGGCTATCACTACGGCGTGACGGCGCTGACGGGCCAGACTGGCGGCACGCTGACGCTATCTCCGGCGCTGGCGGCTAAGCGCACGCTCACAATCGCCGGTACGCTGACGTCGAATCTCGTCGTTGTCCTGCCGACCTGGGTCTACACCTGGCGCATCGTCAATAACACCGGTGGCGCGTACACCGTCACGGTAAAAAATGCGGCGACGACCGGCGGGGTCATCCCTCAAAACGGGGTTTCGACGACCGTACATTGCGACGGCACGCAGGTCTCGTTCGACTCGCCTAACATCCCGGCCGCGGTGCTGTCCACGCAGCCAATGCAGCTCGGTCAGGCGACAGGTCGTTTACTGGCCGTGCGCCGCTTTGCCGTCGCTGGCGCGACGACCTACACACCGACAACCGGTACTAACACCGTGATCGTCGAGGTCGTGGGCGCAGGCGCGAGCGGGGCCGGTACCGTGGCCGCGTTGAGCGGGCAAGCCGCCGCAGGTGGCGGTGGCGGTGGCGGCGCCTACGCTAAGGCGCGCATCGTGTCGGGCTTTGCGGGCGTGACGATCACCGTCGGCGCGCCGGGCGTGTCGGCTGCACCGGGTAACGCAGGTCAAGCCGGTGGTGCATCGAGCTTTGGTAGTTTGGTCGTGTGTCCGGGCGGAGCGGGCGGCCCGCAGGGCCAGGGCAGTTCGTCGGCGAACTACTCCGCCCCCGGTCTGGGCGCCGCGGCGCCGACCTTTGGCGGTAGCGCCGACGTGATCATGGCCGCAAGCGGCGCGGCAGGCAGCCCGGGTCTGTTGTTCAGCTCGAGCATCGTCATCAGCGGCAACGGTGCTAACACGCCGTACGGTTCGGGCGGCGGCGGCGCGGGGTCGAGCACGGCCGGTCAGACCGGTACGGGGTTGAGCGCCGGCGGTCAGGGTAGCGGCGGCGGTGGCGGATACAGTACGTCGGGCGGTAGCCCTGGTAGCGGCGGCTCGGGCGGTGGCGGCCTCGTACTCGTTTGGGAATACGCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5dba5b2d7a441eb7db43c32a186a3963a5da58f11c0372c80433ffc150514acd
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9021
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50