Protein

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Genbank accession
AMO43345.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSELRVNSIRSVSGSSSIAVGNDGSLNVPGGLTVAGKDVSGGGLDSGPTSERPTAAPNVIRWNTSTEVLETYFPFSTNQSDPGWVAVGGRNLLARVIRSDAWSSCDIRWGQADSRNSKYYGYEIEATFFEPSSANRNMYARWIRGDSSVDTGNNYRWSYEWIHSNDGISRHNARPTTYFPISTSNNGSYQLRSNGEATLRTSIKMSNCPNSSAAERWSFTVHSGGDSEQDGFYMVGGGVWRCPYRRDNNAYPLNGIRFYLSGGTMRGTTGPNTIISVFGISGYETENMGYVTVG
Physico‐chemical
properties
protein length:294 AA
molecular weight: 32105,74360 Da
isoelectric point:6,83741
aromaticity:0,11224
hydropathy:-0,56156

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage S-RIM44
[NCBI] 		1278485 Uroviricota > Caudoviricetes > Pantevenvirales > Vellamovirus > Vellamovirus rhodeisland44
Host Synechococcus
[NCBI] 		1129 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AMO43345.1 [NCBI]
Genbank nucleotide accession
KU594607.1 [NCBI]
CDS location
range 104391 -> 105275
strand +
CDS
ATGTCTGAACTAAGAGTAAATAGTATTAGATCTGTGAGCGGTAGTAGTTCTATTGCTGTCGGTAATGACGGATCTCTTAATGTCCCTGGTGGACTAACCGTTGCGGGTAAAGATGTTTCTGGTGGAGGATTAGATTCTGGTCCTACATCCGAAAGACCTACTGCTGCACCGAATGTTATCAGATGGAATACTTCTACGGAAGTATTGGAGACATATTTTCCATTCAGCACTAACCAGAGTGATCCTGGTTGGGTTGCTGTTGGAGGAAGAAATCTGCTAGCAAGAGTCATTCGCTCAGACGCATGGTCTAGTTGTGATATTAGATGGGGTCAGGCTGATAGCCGTAACTCAAAATATTACGGTTATGAGATTGAAGCAACATTTTTTGAACCATCTTCAGCTAACAGAAACATGTATGCTAGATGGATTCGTGGCGATTCTTCAGTTGATACTGGAAACAATTATAGATGGTCTTACGAGTGGATTCACTCTAATGATGGTATTTCTAGACATAATGCTAGACCAACAACTTACTTCCCAATTTCAACATCAAACAATGGTTCATACCAGTTGAGATCAAACGGTGAGGCAACACTAAGAACATCGATTAAGATGTCCAATTGCCCTAACTCATCTGCTGCAGAAAGATGGTCATTCACTGTTCACAGTGGAGGAGACTCCGAGCAGGATGGATTCTACATGGTTGGCGGTGGTGTTTGGAGATGTCCTTACAGAAGGGACAACAACGCTTATCCACTAAATGGCATCAGATTCTATCTGTCAGGTGGAACAATGAGAGGAACCACAGGTCCAAATACTATTATTTCAGTATTCGGAATCTCTGGTTACGAGACAGAAAACATGGGTTACGTTACCGTAGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1e7f2d4bf68feab7a7316e9c46471b0b1c34da051d2083692e5b457519e12040
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7150
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The genomic content and context of auxiliary metabolic genes in marine cyanophages Marston,M.F., Martiny,J.B.H. and Crummett,L.T. 2016-12 — GenBank