Protein

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Genbank accession
YP_053020.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MTIQNKEPFVYATGNGVTATIPFTFPANSASDVYGAINGIDQSVTVVLSPDQINSPGGTLTFNGGAAPLGSNILVYRNTKMEQTLSYPTKGSFPSKSHESAMDKLVMIAQDLNFLLASRCLRAPNGEKFIKELPPIQERAGKFLGFDPAGNPYAAAPIRGEDGTDGLPPYISDGTDGFNAGNWVAFSVQDKSYKDTGVRALGIDGLPPYISNGTDGFTSGNWIVDDGSTNYVDTGVRAKGDKGDKGDDALSPYVSDGTDGFTAGNWVADNGSGAYADTGIGAKGDKGDTGDDGLPPYISDGSDTFVAGNWIADNGSGVYVDTGIPARPNLQYATETTIGGMRWSLVGTTLNLYFTDV
Physico‐chemical
properties
protein length:357 AA
molecular weight: 37346,61830 Da
isoelectric point:4,30222
aromaticity:0,09804
hydropathy:-0,32073

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage VP5
[NCBI] 		260827 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio cholerae
[NCBI] 		666 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_053020.1 [NCBI]
Genbank nucleotide accession
NC_005891 [NCBI]
CDS location
range 19360 -> 20433
strand +
CDS
ATGACTATCCAGAACAAAGAACCCTTTGTATATGCCACTGGTAACGGAGTGACGGCCACTATTCCCTTCACGTTTCCGGCCAACTCGGCCTCGGATGTGTATGGTGCAATCAACGGAATAGACCAATCAGTAACTGTGGTGCTGAGTCCCGACCAGATAAATAGTCCAGGCGGAACATTGACATTTAATGGCGGCGCGGCTCCCTTGGGTTCAAATATTTTGGTCTATCGCAACACAAAGATGGAGCAGACTTTGTCGTACCCGACTAAGGGCAGCTTCCCATCCAAGTCACATGAGTCTGCCATGGACAAATTGGTGATGATTGCGCAGGACTTGAATTTCCTTTTAGCGTCTCGTTGCTTGAGAGCACCGAACGGGGAAAAATTCATCAAGGAATTGCCACCAATCCAAGAGCGCGCCGGAAAATTTCTTGGCTTTGACCCTGCAGGCAACCCATATGCGGCAGCTCCAATTCGCGGCGAGGACGGCACGGACGGTCTTCCCCCTTACATCTCGGATGGCACTGATGGATTCAACGCCGGAAACTGGGTGGCGTTTTCTGTTCAAGACAAATCCTACAAAGATACAGGCGTCCGTGCCCTTGGTATTGACGGCTTGCCTCCTTACATCTCGAACGGCACTGACGGGTTTACGTCAGGAAACTGGATTGTCGACGACGGAAGCACTAACTACGTTGACACGGGGGTAAGGGCGAAGGGAGACAAAGGCGACAAGGGTGACGACGCTCTATCGCCTTATGTGTCTGACGGGACTGACGGATTCACCGCAGGAAATTGGGTTGCGGACAATGGCTCCGGTGCTTATGCGGACACGGGAATTGGGGCAAAAGGCGATAAGGGTGACACGGGTGACGACGGTCTGCCACCTTACATCTCGGACGGTAGCGATACTTTTGTTGCAGGCAATTGGATTGCAGACAACGGCTCTGGTGTGTATGTTGATACAGGCATTCCTGCTCGACCGAATTTGCAATACGCCACGGAAACCACAATCGGCGGTATGCGTTGGTCACTGGTTGGAACTACCTTAAACTTGTATTTTACGGACGTGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
d40aa51cc88ff69404d6db855d78bc51d17da8e9b3be4ba01793e56707516406
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8014
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50