Protein

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UniProt accession
A0A0A8JBP8 [UniProt]
Protein name
RNA ligase 1 and tail fiber attachment catalyst
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
Protein sequence
MSLVEIYNDLMNLVQNNEAFEYKDQRSIGGGLYRIFSYRMASYTDFCEPNAKETRGSMWEINEDGTMIRCAARTMNKFFNAYENPFTMFDKNMLSTEIEVAMDKRDGSIISTFKDNDGIIRCKSHTSLSSEHAINSNAIMRPGSSLYQYVEEAELQQYTVNLEYTSPEYRIVLPYQSEKLTVLNVRHRITGELLCGEKLRQKFPMLAMRSTNMINGQNIASNFPMRTTVLETVEAVKGMRDIEGFVAVLKDGTMFKIKTDWYCALHFNKDSINVDSRLYESVLQGASDDLRQMFSNDQYCLDKIKRMEDLVFSTYNSFEKFVNDFYNEFKHLERKEYALKVQKLLPKELNHQGYAFSLYNNKPFDLKENMIKYSKEVLKDF
Physico‐chemical
properties
protein length:381 AA
molecular weight: 44517,20340 Da
isoelectric point:5,83671
aromaticity:0,11811
hydropathy:-0,51312

Domains

Domains [InterPro]
DC_1201
ATT
1–55
DC_1201 IPR019039 IPR049042
IPR012648
Unmapped
5–362
IPR012648
G3DSA:1.10.3550.20
RBD
260–381
G3DSA:1.10.3550.20
A0A0A8JBP8
1 381
Architecture
ATT
STR
RBD
ATT 1-55 | STR 56-262 | RBD 263-381
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage K64-1
[NCBI] 		1439894 Uroviricota > Caudoviricetes > Alcyoneusvirus >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BAQ02827.1 [NCBI]
Genbank nucleotide accession
AB897757 [NCBI]
CDS location
range 287312 -> 288457
strand +
CDS
ATGAGTTTAGTAGAAATCTATAATGATTTAATGAATTTAGTACAAAATAATGAAGCATTTGAATATAAAGATCAGCGTTCAATTGGTGGTGGTTTGTATAGAATCTTTTCTTATCGAATGGCCTCATATACTGATTTCTGTGAACCTAATGCCAAAGAAACACGAGGTTCAATGTGGGAAATCAATGAAGATGGTACTATGATTCGTTGTGCAGCCCGTACTATGAATAAATTTTTTAACGCATATGAAAACCCATTCACAATGTTTGATAAAAATATGCTTAGTACTGAAATTGAAGTGGCGATGGATAAACGAGACGGTTCTATTATCAGTACTTTCAAGGATAATGACGGAATTATTCGTTGTAAATCTCACACTTCTCTATCTTCAGAACACGCAATTAATAGTAATGCTATCATGCGTCCTGGTTCTAGTTTATATCAATACGTAGAAGAAGCTGAACTTCAACAATATACCGTGAACCTCGAATATACTTCACCTGAATATCGTATTGTATTGCCATATCAGAGCGAGAAACTGACTGTATTGAACGTTCGTCATCGAATCACTGGTGAACTACTGTGTGGTGAAAAACTGCGTCAGAAGTTTCCTATGCTCGCTATGCGTAGCACTAATATGATAAATGGTCAGAACATTGCAAGTAATTTTCCAATGCGTACTACAGTACTTGAAACGGTGGAAGCAGTAAAAGGAATGCGAGACATTGAAGGATTTGTGGCAGTACTGAAAGATGGCACAATGTTTAAAATTAAAACAGATTGGTACTGTGCTTTGCATTTCAATAAGGATAGTATTAATGTTGATTCTAGACTTTACGAATCAGTGCTACAAGGTGCAAGTGATGATTTAAGGCAAATGTTCTCTAATGATCAGTATTGTCTTGATAAGATTAAAAGGATGGAAGATTTAGTATTCAGTACTTATAATTCTTTTGAAAAATTTGTTAATGATTTTTACAATGAATTTAAACATTTAGAACGCAAAGAATATGCACTAAAAGTACAGAAACTTCTACCAAAAGAATTAAATCATCAGGGTTATGCTTTCTCTTTGTATAACAATAAACCGTTTGATTTAAAGGAAAACATGATCAAATACAGCAAAGAAGTATTAAAAGATTTCTAA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0005524 ATP binding Molecular Function IEA:UniProtKB-KW (UniProt)
GO:0046872 metal ion binding Molecular Function IEA:UniProtKB-KW (UniProt)
GO:0003972 RNA ligase (ATP) activity Molecular Function IEA:InterPro (UniProt)

Tertiary structure

PDB ID
6267a9a3283781e81eb9c255a6326bf6f829bdee9dda05402caa7a3561cbb463
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8906
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50