Protein

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Genbank accession
AGG58282.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,86
Protein sequence
MSTEITIKNITPIDGSTTVTVATGLKLVNFLSDMNDVQPYAGNKKKYLTVNEAETGTEWSDVNATTFGGKELSNFIFGDNLRGTTKWTTGSDNIIKSGSYFVTTDYTSLPISVNGHVIHQQMDSSDSYAKQTYTPYNDNKSWVRTKNNNVWTEWLRVLQTEGVINLYARTEADLNQMVQQNNDQFAASGFVHYGQHLSNSSAGITSINEGLWIWTQEPTFANTLSMGRYNTSDGLGQSETPFPVTHVAGFISELMFAQRGTATESAIKFPEAPDGTIIYDSTDDARGTGNANLNLLTEVDPKYGDIASSQNEAVARAFEGELLNGDLRDGTTSWIAVSTHYRQTITVTPNVAITLSGFNEYGTISIFNGDTGSGANILGEIAQGVSGSVTVTPTLSQVRIYFIGAFGTALNCQAGVCKATEEVVTERVDMFGGEFFLEEVTATNPYVYPKGMIQSQATTMNGIPTERSNRPDTYYSVFGGDTGSEGLGVDFFSATDADKQLMLSDDTNNLFIMNDGRLVSWRMRQRTIAGAGNGDWANVNPAVKAINSNLKYSADGSYGLAAAQGILDTSDDFYGDGTNASAVYYATAHTANTNDEHGVFKAGLGNADVPDVAVNGLCFFHVWGTVPRLNQGAYHPFNDMGSAKATDGYWYQSSLIKSLTDCFTHNTGGDIASGVSGREVGNLYHDGIGASGQGGVIDDRLSAYEFTLEDVSQAKAKLKNGSLRGKQKLPMCAFVDAVDTDGSSNPTLYWTADSNPTGLTAFDVPIGSVVAGIREDGTGYYVGKVGAHTAHPTSVSMREAVVRSSNKYLIVFNTETSVEGNADNGFTVNDVIGDPANIIQTQALVNGWLGYWNPNIPDGTSLLYNQATLTRKRIDSGVIKRTLTSNNGTTWGTDTLAFDFTINAINAASYIPANRVEIWHYQAAPYQTEQDVNRPVLFGEGGVGSVTYTCKSGTTYSIFAESVLGKVLTNSNKATAVGSSTMQSVWLDGVAHKMQPYKPLAHAPVIMAAPENDSPAVKALIYPTSENQQVSLNVAYNELVWGGAGWGDDSTVRIIDGQGTYINLNGDTCLYGSNRTTKPIGYTKNRARVGTQVPGVDL
Physico‐chemical
properties
protein length:1098 AA
molecular weight: 118071,07680 Da
isoelectric point:4,79291
aromaticity:0,09563
hydropathy:-0,29180

Domains

Domains [InterPro]
DC_1387
STR
7–1098
DC_1387
cd19958
STR
92–157
cd19958
AGG58282.1
1 1098
Architecture
STR
STR 7-1098
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AGG58282.1
1 1098
Domain Start End Length (AA) Confidence
N-terminal 1 223 223 0,6282
Central domain 224 517 295 0,7114
C-terminal 518 1098 580 0,4589
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-223
Central
224-517
C-terminal
518-1098

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage henriette 12B8
[NCBI] 		573174 No lineage information
Host Vibrio splendidus
[NCBI] 		29497 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGG58282.1 [NCBI]
Genbank nucleotide accession
HQ316582 [NCBI]
CDS location
range 71867 -> 75163
strand -
CDS
ATGTCAACTGAAATTACTATTAAGAACATAACCCCAATCGATGGGTCGACCACGGTTACTGTGGCGACTGGTCTAAAATTGGTAAACTTCTTAAGCGATATGAATGATGTTCAGCCATATGCTGGCAATAAGAAAAAATATCTAACCGTTAATGAGGCGGAAACTGGTACAGAATGGTCTGATGTCAACGCAACAACGTTTGGCGGTAAAGAGCTGAGTAATTTTATATTTGGTGATAATTTACGAGGCACGACCAAATGGACTACCGGATCAGACAACATCATAAAGAGTGGTTCGTACTTTGTAACTACAGATTACACGAGTCTTCCGATTTCGGTGAACGGTCATGTAATCCACCAACAGATGGATTCTAGTGACTCTTACGCCAAACAAACATACACACCTTATAACGATAATAAATCATGGGTTCGTACAAAAAACAATAACGTCTGGACTGAATGGCTAAGGGTATTACAAACTGAAGGTGTTATCAATTTATATGCGAGAACTGAAGCAGATTTGAATCAGATGGTTCAACAGAATAATGACCAGTTCGCGGCAAGTGGTTTTGTTCATTATGGGCAACACCTTAGTAATTCAAGCGCGGGTATTACGTCTATTAATGAGGGGTTATGGATATGGACGCAAGAACCCACATTCGCAAATACCCTTAGTATGGGTCGTTACAATACAAGTGACGGGCTTGGGCAGTCTGAAACACCTTTCCCAGTAACACATGTTGCAGGTTTTATATCCGAGTTAATGTTCGCGCAGCGTGGAACTGCAACAGAAAGTGCAATCAAATTCCCAGAGGCACCAGACGGTACAATCATCTACGATTCAACAGATGATGCACGTGGAACTGGTAACGCTAACTTAAACTTACTTACAGAAGTAGACCCTAAGTACGGTGATATTGCTAGTTCACAGAATGAAGCAGTAGCAAGGGCTTTTGAAGGTGAATTATTAAACGGTGATTTGCGAGACGGAACTACAAGTTGGATTGCTGTCTCTACGCACTACAGACAGACTATTACTGTGACCCCTAATGTTGCTATTACCCTGTCAGGTTTTAATGAGTACGGTACAATATCAATATTTAATGGTGATACGGGTTCAGGTGCGAATATATTAGGTGAAATAGCACAAGGTGTATCAGGTAGCGTTACAGTTACCCCGACCTTATCACAGGTTCGTATCTACTTTATTGGCGCATTTGGTACTGCTTTAAACTGTCAAGCAGGAGTCTGTAAAGCAACAGAAGAAGTAGTTACAGAACGTGTTGATATGTTCGGTGGTGAGTTCTTCCTTGAGGAAGTTACAGCAACTAACCCTTACGTATATCCAAAGGGAATGATTCAATCACAAGCAACGACTATGAACGGTATCCCTACAGAACGTAGTAACCGACCTGATACATACTACTCAGTATTTGGCGGTGATACAGGTTCAGAGGGTTTAGGTGTTGATTTCTTCTCAGCAACAGACGCAGACAAGCAGTTAATGCTATCTGATGATACTAACAACTTGTTCATTATGAATGATGGTCGCTTGGTTTCTTGGAGAATGCGTCAACGTACAATTGCAGGTGCAGGTAATGGTGATTGGGCTAACGTAAATCCGGCAGTTAAGGCAATCAATTCAAATCTGAAGTACAGTGCGGATGGTTCGTATGGGTTGGCAGCAGCGCAAGGTATTTTAGATACATCAGATGATTTTTACGGCGATGGTACCAATGCAAGTGCGGTGTACTACGCAACCGCACACACCGCTAACACAAACGATGAACATGGTGTATTTAAAGCAGGGCTTGGAAATGCAGATGTACCCGATGTAGCAGTAAATGGGCTTTGTTTTTTCCACGTATGGGGAACTGTTCCAAGACTGAACCAAGGTGCTTATCACCCGTTTAATGATATGGGCTCAGCCAAGGCTACAGATGGTTACTGGTATCAAAGCTCACTAATAAAATCACTTACGGACTGCTTCACTCATAATACTGGCGGTGACATAGCATCTGGTGTATCAGGCCGAGAAGTGGGTAATCTTTATCACGACGGCATTGGTGCGAGTGGTCAAGGTGGTGTGATTGATGACCGTCTAAGTGCTTATGAGTTTACTTTAGAAGATGTATCTCAAGCTAAAGCTAAACTAAAGAATGGTTCTTTGCGTGGTAAGCAGAAGTTGCCTATGTGTGCGTTCGTAGATGCTGTTGATACGGATGGGTCATCAAACCCAACATTATATTGGACTGCAGACTCTAATCCTACTGGGCTAACTGCATTTGATGTACCTATTGGTTCAGTCGTTGCAGGTATCCGTGAGGATGGTACAGGGTACTATGTTGGTAAAGTAGGGGCACATACTGCACACCCAACTTCTGTATCCATGCGAGAAGCGGTAGTACGTTCAAGCAACAAATACCTAATCGTGTTCAATACTGAAACCTCAGTTGAAGGTAACGCAGATAACGGTTTCACTGTTAATGATGTTATCGGCGACCCTGCGAATATCATCCAGACGCAAGCATTGGTTAATGGTTGGTTAGGGTATTGGAATCCTAATATTCCAGATGGTACTTCGCTCCTATATAACCAAGCAACTCTTACTAGGAAGCGTATTGATTCAGGGGTAATAAAAAGGACATTAACTTCTAACAACGGTACTACTTGGGGAACTGATACTCTTGCGTTTGATTTTACAATAAATGCAATCAATGCAGCCAGTTACATTCCAGCTAATCGCGTTGAGATTTGGCACTACCAAGCAGCACCATATCAAACAGAACAAGATGTAAACCGTCCTGTATTGTTTGGTGAGGGAGGTGTTGGAAGTGTGACCTACACCTGTAAATCAGGTACGACTTACTCCATATTTGCTGAGAGTGTTCTAGGTAAGGTTCTTACCAACAGCAACAAAGCAACCGCAGTGGGGAGTTCCACTATGCAGTCAGTGTGGCTTGACGGGGTGGCACACAAAATGCAACCGTACAAACCATTGGCACACGCCCCTGTGATAATGGCAGCGCCAGAAAACGATTCACCTGCAGTTAAGGCACTCATTTATCCTACAAGTGAGAACCAACAGGTTAGTCTTAACGTGGCGTACAATGAGTTGGTTTGGGGTGGGGCTGGTTGGGGCGATGATTCAACAGTCCGTATCATTGACGGTCAAGGTACTTATATCAACTTAAATGGCGACACTTGTTTGTATGGTTCAAACCGTACAACTAAACCAATCGGTTACACTAAGAATCGGGCAAGAGTTGGTACTCAGGTACCCGGTGTCGACCTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e2c791ec4357083c4d5b9322c39adeed9d669c2ae17d560746a0e221aa5091d4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3234
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Vibrio phage henriette 12B8 Henn,M.R., Polz,M., Kauffman,A.K.M., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Koehrsen,M., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Richards,J., Rizzolo,K., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank