Protein

View in Explore
Genbank accession
YP_009275524.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MIEIYPSLLDGEPLERHPIGRRMTIHAWLTANSPGYRCHDVHPFSIGVVPAEVALCGDLTDKQKKAHEEFVHPGEWAERIIDRGDIVRIYKLPRGTDPFTITAALFKGAQSVFRMLMPQLPGMPTNPGQGASLSETSARGNKVKLGDAIREVAGRRLIYPDYILPPRKYFAGPREQWTEMLLCIGRGRFQIAEGAAKIGETSFLALGADASFQIFEPGQNVSGHPASVWWHLVEEVGASSTGNAGLDLTESSNLTPNPSATTFTFSGTNIIISAGAGSFPSDLVAGTILRVEAMYPYSVNDGGGTNRDVVTGDIAQLGLDVGDEIEVVGTNGGLYIVNDITSTSMTLNYSNGSPANALQTGSGSAAIGPRGLRYRITAYSAQQLTVERLTSAGGVDVDWPGFTALNSSTSRVTIDPTSLEGGWRGPFPACPVSEKTNFVEIDVFCPEGLCGVGREGQIYQIRTYYDIQWRDMAIGGAWTTVSKNHAGSSLDQQGFTDGISLPYMMRPEFRIRKVFVNQGGNSTSEYRDRTQWYGMRARLQAPSSYAGVTTMAVRYRSSDRIAAQTESRVSVEATRMLPTRQNGAWTPEIATRDIVPFLCYIAKERGYTDADLDLEELDRLDAIWKARGDTFDMIYEDGKVTVAQVMDDVLAAGYAEKTIKRGVISAARDEPRTTFGHMYSPQNMDGPLRISISAPSEDDYDGVDVEFVNANGWIEDTVQCRLPGDVGRKVEKITAVGVTNRDRAWRYGMRRRMAQRYRRTEYSFDTGLDALNSEFWDYVALAGDVPGPGLAQSAYLKSFVISGNSVLIESSEPLDWSLLNSPALYLRRPGGTVSGGYPASRIDDYRLSIPSIDFVPDVSWEIEPPHLLLGNPYPVLISSIDPNGNTAASVRAVNYSERVYDYDDSFAPE
Physico‐chemical
properties
protein length:909 AA
molecular weight: 99575,52930 Da
isoelectric point:5,07302
aromaticity:0,09241
hydropathy:-0,29648

Domains

Domains [InterPro]
DC_0118
STR
2–752
DC_0118 DC_0808
NF040662
Unmapped
434–901
NF040662
YP_009275524.1
1 909
Architecture
STR
RBD
STR 2-752 | RBD 780-909
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage JBD44
[NCBI] 		1777052 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa PA14
[NCBI] 		652611 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009275524.1 [NCBI]
Genbank nucleotide accession
NC_030929.1 [NCBI]
CDS location
range 22786 -> 25515
strand +
CDS
GTGATCGAAATCTACCCATCGCTCCTTGACGGAGAACCGCTGGAGCGGCATCCGATCGGTCGCAGGATGACGATTCATGCCTGGCTGACCGCGAATTCTCCTGGGTACCGCTGCCACGATGTCCACCCGTTCTCCATCGGTGTTGTCCCCGCCGAGGTTGCGCTCTGCGGTGACCTGACCGACAAGCAGAAAAAGGCGCATGAGGAGTTCGTCCACCCCGGCGAGTGGGCCGAGCGCATCATCGACCGCGGCGACATTGTGAGGATCTACAAGCTCCCGCGCGGGACTGATCCGTTCACGATTACTGCGGCCCTTTTCAAGGGGGCGCAATCGGTTTTTCGGATGCTCATGCCTCAATTGCCCGGCATGCCGACGAACCCCGGGCAGGGCGCGTCGCTCTCTGAAACCAGCGCGCGCGGGAACAAGGTAAAACTCGGCGATGCGATCCGCGAAGTTGCTGGCCGTCGTCTGATTTATCCCGACTACATCCTGCCGCCCAGGAAGTATTTCGCCGGTCCGCGTGAGCAGTGGACCGAAATGCTGTTGTGCATTGGCCGTGGTCGGTTCCAGATCGCCGAAGGTGCAGCGAAAATCGGTGAAACGTCGTTCCTGGCACTGGGCGCTGATGCCTCTTTCCAGATTTTCGAACCAGGGCAGAACGTCAGCGGGCACCCGGCATCGGTCTGGTGGCACCTGGTTGAGGAAGTTGGTGCGAGCTCAACTGGTAATGCCGGCCTGGACCTGACCGAGAGCTCCAATCTCACGCCGAACCCGTCGGCAACTACGTTCACGTTTTCCGGAACGAACATCATCATTTCTGCCGGAGCCGGGTCGTTCCCCTCTGACTTGGTTGCGGGGACGATCCTCCGGGTTGAGGCGATGTACCCCTATTCGGTTAACGATGGCGGCGGGACGAATCGCGACGTCGTGACGGGGGATATCGCTCAGCTCGGGCTGGATGTTGGCGATGAGATCGAGGTTGTTGGCACCAACGGCGGCCTCTACATCGTAAACGACATCACCTCCACGTCGATGACGCTCAACTACAGCAACGGTTCTCCGGCGAATGCGCTCCAGACCGGGTCCGGCAGCGCCGCAATCGGCCCGCGCGGACTGCGCTATCGGATCACGGCGTACAGCGCGCAGCAACTCACAGTCGAGCGGCTGACCAGTGCCGGCGGTGTAGATGTGGACTGGCCAGGATTCACCGCTCTCAATTCGTCTACGTCTCGCGTCACGATCGATCCGACTAGCCTCGAAGGGGGCTGGCGCGGGCCATTCCCTGCATGCCCTGTATCGGAGAAGACCAACTTCGTCGAGATCGACGTGTTTTGCCCGGAAGGCCTGTGCGGTGTAGGCAGGGAAGGGCAGATCTACCAGATCCGCACCTATTACGACATCCAGTGGCGAGACATGGCCATCGGCGGCGCATGGACGACGGTCAGTAAGAACCATGCTGGCAGTTCTCTCGACCAGCAGGGTTTTACGGACGGCATCTCGCTGCCGTACATGATGCGGCCCGAGTTTCGCATCAGAAAAGTGTTCGTCAACCAGGGCGGCAACTCAACATCCGAGTACCGAGACCGCACTCAGTGGTACGGGATGCGCGCGCGCCTCCAGGCTCCGTCGTCCTACGCCGGCGTCACTACAATGGCTGTTCGATATCGGTCGTCTGACCGTATCGCGGCGCAGACAGAAAGCCGCGTCTCGGTAGAGGCTACCCGCATGCTACCGACTCGGCAGAACGGTGCATGGACACCCGAGATAGCAACGCGAGACATCGTCCCATTCCTCTGCTACATCGCGAAGGAACGCGGCTACACCGATGCGGATCTCGATCTTGAGGAACTCGATCGGCTGGACGCAATCTGGAAGGCCCGCGGCGACACGTTTGACATGATCTACGAGGACGGCAAGGTCACGGTCGCGCAGGTCATGGACGATGTGCTTGCCGCCGGGTATGCGGAGAAGACCATTAAGCGCGGCGTGATCTCCGCAGCCCGAGACGAACCAAGGACCACATTCGGGCACATGTACTCGCCGCAGAACATGGATGGTCCGCTGAGGATCAGCATCAGCGCGCCGTCTGAGGACGACTACGACGGCGTCGATGTAGAGTTCGTCAATGCCAACGGCTGGATCGAAGATACCGTCCAGTGCCGACTGCCCGGCGATGTTGGCAGGAAGGTCGAGAAGATCACGGCTGTCGGTGTCACAAACCGCGATCGCGCCTGGCGCTACGGGATGCGCCGCCGGATGGCTCAGCGATACCGGAGAACTGAGTATTCGTTCGATACCGGCCTAGACGCGCTGAACAGCGAGTTCTGGGATTATGTGGCCCTTGCCGGCGATGTTCCCGGCCCTGGCCTGGCGCAGAGCGCATACCTGAAATCGTTCGTTATCTCTGGAAACTCGGTCCTGATCGAGTCCAGCGAGCCGCTCGACTGGTCACTGCTGAACTCGCCAGCGCTCTACCTGCGGCGCCCAGGCGGAACGGTTTCCGGTGGATATCCGGCGTCGAGGATCGACGACTACCGGCTGAGCATTCCCAGCATCGATTTCGTCCCTGATGTTTCGTGGGAAATCGAACCGCCGCACCTGCTGCTGGGAAATCCATACCCGGTGCTGATCAGTTCCATCGATCCCAACGGAAATACCGCGGCATCTGTTCGTGCGGTGAACTATTCTGAAAGAGTATACGATTATGACGATTCATTTGCGCCTGAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e31841c410a312ebb521e2780f78f093dc35833fe6904046186692fe4d7951ed
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8235
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacterial phenotypic diversity mediated by prophage integration Bondy-Denomy,J., Maughan,H., Gong,Y., Guttman,D.S., Davidson,A.R. and Maxwell,K.L. 2023-08 — GenBank