Protein

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Genbank accession
QXV84460.1 [GenBank]
Protein name
receptor-binding tail tip protein
RBP type
TSP
Evidence DepoScope
Probability 0,94
TSP
Evidence RBPdetect
Probability 0,86
Protein sequence
MGFFAGKYSDGKTVLSLNTESGGDINAHKTPNANTIFHSDMPFVLVESTYESALSNAGNGFFVCQMPSVIANLKSNDPGMVILTAVEINGTHRAFLNGTQSQVGQFLTFFEDLSIGRAGAELGLTSAFASGNSLAHGTYTYNSSLGHEESIARQGTGGTISQASGFNLYRPKGAYAGEAIGRAWTLAGFPAGASTVPIDGGNADYWHPNWQAPIGAAYRGHNWFYVCNSNIRGYVGKKGTVPANVNLLYQSPTYPDKVYICKGSTSNLAAQAAKKVYVQDWYNITPTKVIWYVLNLRYSNGNMGVSGNPFTGSDILITPSNFTIKGVSLPNTGYKFINQNAFGNLGYRPDMEYIGNNAAYTGAFGDTTARCEIVGSSNGSLWSPVDYGGAKSQISIYKFGAGKQWYVNSSNNTIGNEHGAVWSPSTVPLRLFPNNVASTYVGDDITPAYPGAGNYYTALATIGLGLPNANATVILTTEVIMGNINTAGGAIRTYGGTAWQVQGRRQHSYTEGDGIFHQILTLPPGYLVPYHSTTAYSYTQTWASRPDELTFRRNGYIYTIKNLGNGNAELGVIIHAAEAAAIFLPRLRVTVQRLT
Physico‐chemical
properties
protein length:595 AA
molecular weight: 63832,51840 Da
isoelectric point:8,57528
aromaticity:0,11933
hydropathy:-0,17933

Domains

Domains [InterPro]
IPR059609
RBD
1–595
IPR059609
QXV84460.1
1 595
Architecture
RBD
RBD 1-595
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QXV84460.1
1 595
Domain Start End Length (AA) Confidence
N-terminal 1 273 273 0,0021
Central domain 274 472 200 0,2205
C-terminal 473 595 122 0,9990
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-273
Central
274-472
C-terminal
473-595

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage SelmaRatti
[NCBI] 		2852006 Uroviricota > Caudoviricetes > Demerecviridae > Tequintavirus > Tequintavirus selmaratti
Host Escherichia coli K-12
[NCBI] 		83333 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QXV84460.1 [NCBI]
Genbank nucleotide accession
MZ501103 [NCBI]
CDS location
range 105283 -> 107070
strand +
CDS
ATGGGTTTTTTCGCTGGAAAATATAGTGATGGTAAGACCGTACTATCTTTAAATACTGAATCTGGGGGTGACATTAATGCCCACAAAACTCCTAATGCCAATACTATATTTCATTCTGATATGCCATTTGTTCTAGTTGAGAGTACGTATGAGAGTGCGTTAAGTAATGCTGGTAATGGGTTCTTTGTATGCCAAATGCCTTCTGTAATAGCCAATTTAAAGAGTAATGACCCTGGTATGGTTATACTAACCGCTGTTGAGATAAATGGTACACATAGAGCTTTTCTTAATGGTACTCAATCCCAGGTTGGACAATTTCTTACATTTTTTGAAGATCTCTCTATTGGCAGGGCTGGTGCTGAATTAGGTCTTACGTCAGCTTTTGCATCTGGTAATAGCTTAGCACATGGTACTTATACTTATAACTCCAGTCTAGGCCATGAAGAGTCAATAGCTAGGCAAGGTACTGGTGGTACTATATCACAGGCTTCTGGGTTTAACTTATACAGACCAAAAGGGGCGTACGCCGGTGAAGCTATAGGCAGAGCATGGACTTTAGCAGGATTTCCAGCAGGAGCGTCTACAGTACCTATAGACGGTGGTAATGCTGACTACTGGCACCCTAATTGGCAAGCCCCTATAGGAGCCGCTTATAGAGGACATAATTGGTTTTACGTTTGTAACTCTAATATACGTGGTTATGTAGGTAAAAAGGGCACAGTACCAGCTAATGTTAACTTATTGTATCAATCTCCTACTTACCCTGATAAGGTTTATATATGTAAAGGTTCAACATCTAACCTAGCAGCACAGGCCGCTAAGAAAGTGTATGTGCAGGATTGGTATAACATAACTCCTACCAAAGTTATTTGGTATGTACTTAATTTGAGGTATTCTAACGGTAATATGGGTGTATCTGGTAACCCATTTACCGGATCAGATATACTTATAACTCCATCTAATTTTACTATAAAAGGGGTTAGTCTACCAAATACTGGATATAAGTTTATCAACCAAAATGCTTTTGGTAATTTAGGCTATAGACCAGATATGGAGTACATTGGAAATAATGCAGCGTACACTGGAGCCTTTGGAGACACCACTGCGCGTTGTGAAATTGTAGGATCTAGTAACGGATCTTTATGGTCTCCTGTAGATTATGGAGGGGCTAAGTCTCAGATTAGTATTTACAAGTTCGGAGCTGGTAAGCAATGGTACGTAAACTCAAGTAATAACACTATAGGTAATGAGCATGGAGCTGTGTGGAGTCCTAGTACTGTACCTTTAAGACTATTTCCTAATAATGTTGCTAGTACCTACGTTGGTGATGATATAACCCCAGCGTATCCTGGAGCAGGTAACTACTATACGGCTCTAGCTACCATAGGACTAGGATTACCTAATGCTAACGCAACGGTAATATTAACTACGGAAGTTATTATGGGTAATATTAATACGGCTGGAGGAGCCATACGCACATACGGTGGTACTGCTTGGCAAGTACAAGGAAGAAGACAGCATAGTTACACGGAAGGTGATGGAATATTCCATCAAATATTAACCTTACCTCCTGGATACTTAGTCCCTTATCACTCCACTACTGCATACAGTTATACTCAAACTTGGGCAAGTAGACCTGATGAGTTAACATTTAGAAGAAACGGATATATTTATACTATTAAAAATCTAGGAAATGGTAATGCTGAATTGGGCGTAATTATTCATGCTGCTGAGGCTGCAGCTATTTTCCTACCTAGATTAAGAGTAACAGTTCAACGCCTTACCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7fbfe033c4be34b2968ee338bee9444fe62d8fe12a520182feb25894d87ef20b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2519
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Systematic exploration of Escherichia coli phage-host interactions with the BASEL phage collection Maffei,E., Shaidullina,A., Burkolter,M., Heyer,Y., Estermann,F., Druelle,V., Sauer,P., Willi,L., Michaelis,S., Hilbi,H., Thaler,D.S. and Harms,A. 2021 — GenBank