Protein

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Genbank accession

BAI83172.1 [GenBank]

Protein name

short tail fibers

RBP type

Evidence UniProt/TrEMBL

Probability 1,00

Evidence GenBank

Probability 1,00

Evidence Phold

Probability 1,00

Evidence RBPdetect

Probability 0,88

Protein sequence

MSNNTYQHVSNESKYVKFDPTGSNFPDTVTTVQSALSKISNIGVNGIPDATMEVKGIAMIASEQEVLDGTNNSKIVTPATLATRLLYPNATETKYGLTRYSTNEETLEGSDNNSSITPQKLKYHTDDVFQNRYSSESSNGVIKISSTPAALAGVDDTTAMTPLKTQKLAIKLISQIAPSEDTASESVRGVVQLSTVAQTRQGTLREGYAISPYTFMNSVATQEYKGVIRLGTQSEINSNLGDVAVTGETLNGRGATGSMRGVVKLTTQAGIAPEGDSSGALAWNADVINTRGGQTINGSLNLDHLTANGIWSRGGMWKNGDQPVATERYASERVPVGTIMMFAGDSAPPGWIMCHGGTVSGDQYPDYRNTVGTRFGGDWNNPGIPDMRGLFVRGAGTGGHILNQRGQDGYGKDRLGVGCDGMHVGGVQAQQMSYHKHAGGWGEYNRSEGPFGASVYQGYLGTRKYSDWDNASYFTNDGFELGGPRDALGTLNREGLIGYETRPWNISLNYIIKIHY

Physico‐chemical properties

protein length:	516 AA
molecular weight:	55387,69850 Da
isoelectric point:	5,77822
aromaticity:	0,07946
hydropathy:	-0,47791

Domains

Domains [InterPro]

DC_0176
STR
1–436

DC_0176

SSF69349
STR
246–346

SSF69349 IPR044916

IPR015173
STR
246–324

IPR015173 IPR037053 IPR027448

G3DSA:2.10.280.10
Unmapped
246–286

G3DSA:2.10.280.10 SSF88874

IPR011083
ATT
337–392

IPR011083

BAI83172.1

1 516

Architecture

STR

ATT

STR

STR 1-323 | ATT 324-392 | STR 393-514 |

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_0176	STR	DC_0176	1	436	Novel HMM	DC_0176	Central	Low	Positional only	613 proteins / 613 hits
SSF69349	STR	SSF69349	246	346	Merged direct domain	SSF69349	Central	Low	Positional only	153 proteins / 153 hits
IPR015173	STR	DC_0719	246	324	InterPro cluster	Bacteriophage T4, Gp12	Central	Low	Positional only	349 proteins / 349 hits
G3DSA:2.10.280.10	Unmapped	-	246	286	Gene3D	None	-	-	-	-
IPR037053	ATT	IPR037053	324	388	Merged direct domain	Phage tail collar domain superfamily	N-terminal	Low	Positional only	37 proteins / 37 hits
SSF88874	STR	SSF88874	330	514	Merged direct domain	SSF88874	Central	Low	Positional only	109 proteins / 109 hits
IPR011083	ATT	DC_0235	337	392	InterPro cluster	Phage tail collar domain	C-terminal	Medium	Text match	1051 proteins / 1051 hits
IPR044916	STR	IPR044916	389	507	Merged direct domain	Short tail fibre protein, C-terminal superfamily	Central	Low	Positional only	2 proteins / 2 hits
IPR027448	RBD	DC_0877	424	514	InterPro cluster	Short tail fibre protein, C-terminal	C-terminal	High	Text match	424 proteins / 427 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Escherichia phage AR1 [NCBI]	66711	Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Tequatrovirus
Host	Escherichia coli O157:H7 [NCBI]	83334	Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Genbank protein accession

BAI83172.1 [NCBI]

Genbank nucleotide accession

AP011113.1 [NCBI]

CDS location

range 87821 -> 89371
strand +

CDS

ATGAGTAACAATACATATCAGCACGTATCAAATGAATCAAAATATGTTAAATTCGATCCTACTGGATCGAATTTTCCTGACACTGTCACGACAGTGCAGTCTGCATTATCAAAAATAAGTAATATCGGCGTAAATGGTATTCCTGATGCAACTATGGAAGTTAAAGGAATAGCAATGATTGCGTCAGAGCAAGAGGTTTTAGATGGAACTAATAATTCTAAAATCGTTACACCAGCTACATTAGCAACAAGATTATTGTATCCAAATGCTACTGAAACTAAGTATGGTTTAACGCGCTATTCAACAAATGAAGAAACATTAGAAGGCTCAGATAATAATTCATCAATAACGCCGCAAAAACTGAAATACCATACTGACGATGTGTTCCAAAATAGATATTCGTCTGAGTCATCAAACGGGGTTATTAAAATATCATCTACACCTGCAGCTTTAGCTGGAGTAGATGATACTACGGCAATGACTCCGCTAAAAACACAAAAACTTGCAATAAAATTAATTTCGCAAATAGCTCCTTCCGAAGATACTGCATCAGAATCTGTGAGAGGTGTAGTTCAATTATCTACTGTTGCGCAAACTCGTCAAGGAACTCTCCGCGAAGGATATGCAATTTCTCCATATACCTTTATGAATTCTGTTGCAACACAAGAATATAAGGGTGTTATACGTTTAGGAACACAATCGGAAATTAACAGTAATTTAGGAGATGTTGCAGTAACAGGTGAAACACTAAATGGTCGAGGAGCTACTGGTTCTATGCGTGGAGTCGTCAAATTAACGACGCAGGCCGGTATTGCCCCCGAAGGTGATAGCTCTGGAGCATTAGCATGGAACGCAGATGTAATTAATACTCGCGGTGGACAAACTATTAATGGTTCTTTAAATTTAGACCATCTTACAGCAAACGGAATTTGGTCGCGCGGCGGAATGTGGAAAAATGGCGATCAACCTGTTGCCACTGAAAGATATGCGTCCGAAAGAGTTCCAGTTGGAACTATTATGATGTTTGCGGGTGATTCAGCACCTCCGGGTTGGATTATGTGCCACGGTGGAACAGTGTCAGGAGATCAATATCCTGATTATAGAAACACAGTTGGAACAAGATTTGGTGGTGATTGGAATAACCCTGGCATTCCTGATATGAGAGGTCTTTTTGTTAGAGGAGCTGGCACGGGCGGTCATATTTTAAATCAACGTGGACAAGATGGTTATGGGAAGGATAGACTTGGTGTAGGATGTGACGGAATGCATGTTGGTGGCGTTCAAGCACAACAAATGTCATACCATAAACACGCTGGTGGTTGGGGGGAATATAACAGAAGTGAAGGTCCATTTGGCGCGTCCGTTTATCAAGGATATCTTGGAACTAGAAAATATTCCGACTGGGATAATGCTTCATACTTCACTAATGATGGATTTGAATTGGGTGGACCGAGAGATGCCCTTGGTACACTTAATCGTGAAGGATTAATTGGTTATGAAACTAGACCATGGAATATATCATTAAACTATATTATTAAAATTCATTACTAA

Genome Context

Tertiary structure

PDB ID

de521ab165c058ac113a2f1efb0c89e531ca30cc7aac76ba7ddd4bd960e25e0a

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,6680

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Literature

Title	Authors	Date	PMID	Source
Isolation and characterization of a coliphage specific for Escherichia coli O157:H7	Ronner,A.B. and Cliver,D.O.	1990	—	GenBank
Characterization of a phage specific to hemorrhagic Escherichia coli O157:H7 and disclosure of variations in host outer membrane protein ompC	Yu,S., Ding,H., Seah,J., Wu,K., Chang,Y., Chang,K.S., Tam,M.F. and Syu,W.	1998	9758911	GenBank
A conductance method for the identification of Escherichia coli O157:H7 using bacteriophage AR1	Chang,T.C., Ding,H.C. and Chen,S.	2002	11808783	GenBank
Analysis of the baseplate region of phage AR1 that specifically infects Escherichia coli O157:H7	Liao,C.P. and Syu,W. Jr.	2002	12542256	GenBank
Morphological, host range, and genetic characterization of two coliphages	Goodridge,L., Gallaccio,A. and Griffiths,M.W.	2003	12957924	GenBank
T4-Like genome organization of the Escherichia coli O157:H7 lytic phage AR1	Liao,W.C., Ng,W.V., Lin,I.H., Syu,W.J., Liu,T.T. and Chang,C.H.	2011	21507986	GenBank

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence

Literature