Protein

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Genbank accession
QIW90285.1 [GenBank]
Protein name
short tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
Protein sequence
MSKGTQIFNHVIDDAGTVTVEVAGTAFDGQTGGNDDLQTCLELIQDHAVQPLPDYPVASTTVAGITKLSDEAAVIDPLNTDSAVTPSSLDYWMQNHATATELQYGFVKLITESTIDTVAPSDPVEAAQKHAFTLKTLNYALNTRFYATESDPGAVRLATNAQATTTGTLSTTVAMTPQRVKEMLDVWANTTASDASETTKGLIRLANGTEVNSTLATEDNLAISPYRFNFRTATTTRKAGFYLPDATVANARASNEHAVTVGTLNLFSANSSRVGVAKIANNLTTNDPLQALSAAMGYKLNNEKIGDAGGTVTGTLKINNVQSVGGTQLMTNGLIESQAMLNMYPVGSVYMSLVSTSPATLFGGTWARLAQGRVLVSEGSYGGRTFAVRQTGGEYEVQLTEATIPAHKHAGWGEHYDGNGIGFGVAKQYGRNNPGSRRTDSDNYLYYTSPVGGNQAHNNVQPYYTVYMWERTA
Physico‐chemical
properties
protein length:473 AA
molecular weight: 50450,36100 Da
isoelectric point:5,22273
aromaticity:0,07822
hydropathy:-0,27167

Domains

Domains [InterPro]
DC_0176
STR
1–450
DC_0176
IPR054500
STR
279–303
IPR054500 SSF88874
IPR053827
ATT
343–472
IPR053827
IPR044916
STR
372–466
IPR044916
QIW90285.1
1 473
Architecture
STR
ATT
STR 1-342 | ATT 343-472 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage V05
[NCBI] 		2724325 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIW90285.1 [NCBI]
Genbank nucleotide accession
MT135024.1 [NCBI]
CDS location
range 108943 -> 110364
strand +
CDS
ATGAGTAAAGGAACTCAAATTTTCAATCACGTGATTGATGATGCGGGTACGGTTACAGTTGAAGTCGCTGGTACTGCCTTTGACGGGCAGACTGGCGGCAACGATGATCTTCAGACGTGCCTTGAATTGATTCAAGATCACGCTGTTCAGCCGTTACCTGATTACCCAGTCGCGTCAACAACTGTGGCTGGTATTACGAAATTAAGTGATGAAGCCGCTGTAATTGATCCGCTAAACACAGATAGCGCGGTTACGCCAAGTTCGCTTGATTATTGGATGCAAAATCACGCAACCGCAACTGAATTGCAGTATGGTTTCGTAAAGCTGATAACCGAAAGCACAATCGACACAGTAGCACCATCAGACCCCGTAGAAGCTGCACAAAAGCACGCATTCACGTTAAAAACGCTGAACTACGCTCTTAACACTCGATTTTACGCGACTGAATCTGATCCGGGTGCTGTGCGTCTCGCGACGAATGCGCAAGCAACGACAACAGGCACACTTTCAACGACTGTAGCAATGACGCCGCAGCGAGTTAAAGAAATGCTTGACGTATGGGCAAACACAACTGCATCAGATGCATCCGAAACTACAAAGGGGTTGATTCGACTAGCGAACGGGACCGAAGTCAACAGTACATTAGCGACTGAAGATAACTTGGCAATTTCGCCATATCGTTTTAACTTTAGGACAGCAACTACGACTCGTAAGGCAGGGTTTTATCTACCCGACGCTACAGTTGCCAACGCTCGTGCGTCGAACGAACATGCAGTTACAGTGGGCACATTGAATCTATTCAGTGCAAATAGTTCTCGCGTGGGTGTTGCTAAAATAGCAAACAATCTGACGACGAATGATCCGTTACAAGCTCTAAGCGCAGCAATGGGTTATAAGTTGAACAACGAGAAGATTGGCGATGCAGGTGGTACAGTCACGGGTACTCTGAAGATCAACAATGTTCAGTCAGTTGGCGGAACTCAGTTGATGACTAATGGTCTAATTGAATCACAAGCAATGCTTAATATGTATCCAGTCGGTTCAGTTTACATGTCGTTAGTATCAACATCACCTGCTACACTTTTCGGTGGTACATGGGCTAGATTAGCACAAGGTCGTGTTCTTGTTTCAGAGGGTTCATATGGCGGGAGAACTTTTGCAGTTCGCCAAACTGGCGGCGAGTATGAAGTTCAGCTAACTGAAGCAACAATACCAGCTCATAAACACGCTGGTTGGGGTGAACATTACGACGGTAACGGTATCGGGTTTGGCGTTGCGAAGCAATACGGGCGTAATAACCCAGGTTCTCGTAGAACAGACAGTGACAACTATCTATACTACACATCACCAGTCGGTGGTAACCAAGCACACAACAACGTACAGCCATACTATACTGTTTACATGTGGGAAAGAACTGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5fa2f5f1dba575d0237434754d6c42632827ec4648b44ae53755c1310d430e19
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7112
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50