Protein

View in Explore
Genbank accession
XNP01087.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MAYSWQEQIKPAGTQDIQCDIEYLDKSYIHVYLDGVETTGYTWTSSTNIRLNTALAASTTVLLIRKTEREYLYIEFASGSPFIEVNVDSQNTQFLHLAQELVEGRAIPGFYGDISMNGYRITNVADPTDPQDAATKNYVDVGDARLDARIDSEHSAWVSAVQAEATTRQAADGALSARASALENTFISGVETVSYPWSTVLTEDTDEVTPGLAFTKAVVEINGVGQIRGYSFEIVDNTILFAETLPAGAVVAARLGVDVTAGDGFATQASVDYLADSLGELAYLDKAEAVSDATGTGDVVAQLNALLAALRTSGVLTS
Physico‐chemical
properties
protein length:318 AA
molecular weight: 34023,21920 Da
isoelectric point:4,19514
aromaticity:0,08491
hydropathy:-0,01604

Domains

Domains [InterPro]
DC_1609
STR
1–318
DC_1609
IPR005604
ATT
13–103
IPR005604
XNP01087.1
1 318
Architecture
STR
ATT
STR
STR 1-12 | ATT 13-103 | STR 104-318
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage RothJ
[NCBI] 		3384155 Viruses >
Host Klebsiella sp.
[NCBI] 		576 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XNP01087.1 [NCBI]
Genbank nucleotide accession
PQ657835.1 [NCBI]
CDS location
range 42567 -> 43523
strand +
CDS
ATGGCATACAGCTGGCAAGAGCAAATCAAGCCAGCTGGTACCCAGGATATCCAGTGTGATATTGAGTATTTGGACAAGTCCTATATTCATGTATATCTCGACGGCGTTGAAACCACTGGATACACTTGGACCAGCTCCACTAATATCAGGCTAAATACAGCCTTGGCAGCAAGCACGACTGTGCTGCTAATCCGTAAGACAGAGCGGGAGTATCTGTACATCGAGTTCGCAAGCGGCTCTCCGTTCATTGAGGTAAACGTAGACTCCCAAAACACACAGTTCTTGCATCTGGCGCAAGAGCTGGTAGAGGGTAGGGCTATCCCCGGATTCTACGGGGATATAAGCATGAACGGATACCGCATTACTAACGTAGCGGACCCGACAGACCCTCAGGATGCCGCGACCAAGAACTATGTAGACGTTGGTGATGCTAGACTTGACGCGCGCATTGACTCAGAACACTCAGCCTGGGTATCCGCCGTGCAGGCAGAGGCCACTACTAGACAAGCTGCAGATGGTGCACTGAGCGCGCGCGCTTCGGCTTTGGAGAATACCTTTATAAGTGGTGTAGAGACGGTAAGCTACCCGTGGAGCACGGTGCTGACCGAGGATACAGACGAGGTGACTCCTGGCCTAGCATTCACCAAGGCTGTAGTAGAGATTAACGGGGTTGGGCAAATTCGCGGTTACAGCTTCGAGATAGTAGACAATACTATACTATTTGCCGAGACTCTCCCTGCGGGCGCTGTCGTAGCTGCCCGGCTAGGAGTTGATGTAACTGCAGGGGACGGATTCGCTACGCAGGCATCTGTAGACTATTTGGCGGACTCCTTGGGGGAATTGGCGTACCTAGATAAGGCGGAAGCTGTGTCCGACGCAACGGGTACAGGTGATGTAGTAGCCCAACTAAATGCACTGCTGGCAGCCCTGCGCACCAGCGGGGTGCTGACATCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2300f061783298d0f05182ebd8fabee9435c9b5637251e2bade8270db583895d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8040
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
KlebPhaCol: A community-driven resource for Klebsiella research identified a novel gut phage order associated with the human gut Rothschild-Rodriguez,D., Lambon,K.S., Latka,A., Costa,A.R., Mantzouratou,A., King,C., Boeckaerts,D., Sheridan,E., Merrik,F., Drobniewski,F., De Angelis,I., Saeed,K., Sutton,M., Wand,M., Andrew,M., Hedges,M., Brouns,S.J.J., Haas,P.-J., Krishnakant Kushwaha,S., Lawson,S., Fordham,S., Lee,Y.-J., Wu,Y., Briers,Y., Weigele,P. and Nobrega,F.L. 2024 — GenBank