Protein

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Genbank accession
AKY02254.1 [GenBank]
Protein name
tail fiber family protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,77
Protein sequence
MRVENLQAETTITENGERVYSPNNKPSPEDIGALSKTGKAANSAKADNANAALYITATDRRDVTPETAHTGSHKKVMRPFFVQNSALPGPYRPGGGYSDLLIMDTYSDATGGRVNALAMDKGANALYHVQGEQDGAWTTSEKVYTTAQKPTAADVGAHPTSWKPSWDDVQSKPAQATRWPKWGEISDKPGTMPPSSHTHPWSQITNIPSYATRWPNWGEIAGKPGNLLTQTTADTRYMSKNDKPNAATLDGQDNSFYRSGYLNEARRFYVGGDANTYYPVVITGHAGFSWARFSISRAFNDPAPNTWNTPTHKGGLTFTWEATGDVSWGGNDRNYRVLEFHETYTTTVAGMQLSVGGMVVWLRGGNARYELHGPCGVKQGVDVHLGTYKASDGKTYVPRKTVSPRDAEIHPRWVVRSYGEVYDRGNRVYSASNKPSAGDVGAYSKSEADSRYLRYHYSGSTSYASIVPPKSNWVRSPTSGFLPYSNGSASLGTNGWRWKDIHGVNIYQNGQKVYSPTNKPSAATIGAEPKLPIDRKRKITYGTGNPSGGSDGDVYIQY
Physico‐chemical
properties
protein length:558 AA
molecular weight: 61060,61670 Da
isoelectric point:9,23988
aromaticity:0,10753
hydropathy:-0,75108

Domains

Domains [InterPro]
DC_1209
STR
11–100
DC_1209 DC_1002 DC_1142
AKY02254.1
1 558
Architecture
STR
STR
STR 11-280 | STR 321-490 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_VorS-PVo5
[NCBI] 		1689660 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio ordalii
[NCBI] 		28174 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AKY02254.1 [NCBI]
Genbank nucleotide accession
KT345706.1 [NCBI]
CDS location
range 39876 -> 41552
strand -
CDS
ATGCGTGTTGAAAATTTACAAGCAGAAACAACAATAACTGAAAATGGGGAGAGAGTATACTCTCCTAATAACAAACCAAGCCCTGAGGATATCGGGGCTCTATCTAAGACCGGTAAAGCAGCTAACTCTGCAAAAGCAGACAACGCCAATGCTGCATTGTATATTACAGCGACAGATCGCAGAGATGTAACGCCCGAAACTGCACATACAGGTAGCCATAAAAAGGTAATGCGACCTTTCTTCGTACAAAACAGTGCTCTGCCCGGACCTTACCGGCCTGGTGGTGGGTACTCCGATCTACTAATTATGGACACTTACAGTGATGCTACCGGTGGCAGAGTAAATGCCTTAGCTATGGATAAAGGAGCTAATGCTCTGTACCACGTACAAGGAGAACAAGATGGAGCTTGGACAACCTCTGAAAAGGTATATACTACTGCTCAGAAACCAACAGCAGCCGATGTAGGTGCTCACCCAACATCCTGGAAGCCTTCTTGGGATGACGTACAGAGTAAGCCCGCCCAGGCTACTCGTTGGCCTAAATGGGGAGAAATTTCTGATAAACCGGGCACCATGCCTCCTAGTTCTCATACCCACCCTTGGTCACAAATCACAAACATCCCTAGCTATGCTACTCGTTGGCCTAACTGGGGAGAGATAGCAGGTAAGCCGGGCAATCTACTTACCCAAACAACAGCAGATACCCGCTATATGAGTAAGAACGATAAACCGAACGCTGCTACCTTAGATGGTCAGGACAATTCTTTCTATCGCTCAGGTTACCTAAATGAAGCCCGTAGATTCTATGTAGGTGGTGATGCAAACACATACTATCCAGTGGTAATCACAGGACACGCAGGATTCTCTTGGGCTAGATTTAGTATCAGTCGAGCTTTTAATGACCCTGCTCCTAACACATGGAACACCCCTACTCATAAAGGAGGCCTAACGTTCACATGGGAAGCCACTGGTGATGTTAGTTGGGGCGGTAACGACCGTAATTACCGTGTGTTGGAGTTTCATGAGACTTACACTACTACGGTGGCAGGTATGCAATTATCTGTTGGTGGTATGGTTGTATGGCTACGTGGTGGTAATGCCCGTTATGAACTGCATGGTCCTTGTGGAGTCAAACAGGGTGTTGACGTTCATTTAGGGACTTACAAAGCATCTGATGGTAAAACATATGTCCCTCGTAAAACAGTAAGCCCAAGAGACGCTGAAATCCACCCTCGTTGGGTTGTACGTTCTTACGGTGAGGTATACGACAGAGGCAACCGTGTGTACTCTGCTAGTAACAAGCCTAGTGCGGGAGATGTCGGTGCATACTCTAAAAGTGAGGCTGATAGTAGATACTTACGTTATCACTACTCAGGTAGTACTTCTTACGCTAGTATAGTACCCCCTAAATCTAACTGGGTACGCAGCCCTACATCCGGTTTCTTACCTTATTCTAACGGTAGTGCTAGCTTAGGTACAAATGGTTGGAGGTGGAAGGATATACACGGTGTTAATATTTATCAGAACGGACAAAAGGTGTACTCTCCTACGAACAAGCCTAGTGCAGCTACTATAGGAGCGGAGCCTAAACTACCTATAGATAGAAAACGTAAAATCACTTATGGTACAGGTAATCCTTCTGGGGGCTCGGATGGTGATGTTTATATTCAGTACTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
990c8a896ceb5dbcd4306e49011fb3c0fb8ef26b3f17322b715613b0c10d4eea
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6335
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Vibrio ordalii Bacteriophage pVo5 Echeverria-Vega,A.B., Morales-Vicencio,P.A., Saez-Saavedra,C.F. and Araya,R. 2016-07-04 — GenBank