Protein

View in Explore
Genbank accession
BDD79561.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MAKQQKFTLDDFSFDKNLDVPDFDFDIKPPKDTRKPIMKVASGLKSGFSAVALSNDFARDMVKKALPKGFGSVYDITEKSASNLKSLYDDTTREIRPFMNDLKRTTARLLPKVEEAMPKKVAQMVKDWTATADQNPSSPNYDPREAEISAQLAGMVKATALLQQKQSEDNDQKDRLREGLEQVRHRDKLKQLDQMRLGIIQLVDYQANVTANYHRKSLELQYRHYFVAVDALEESKRSNAEMKAALAAIVHNTALPEQVKLHASDTFKQLAKKQIGSVIGNTIFGRSSNFIDTLTGNLKKTASARVKNAVGLGRGALGDVNAALDDMDLAEAMGMKTDPYHAGGLAAGAFGTSVIGDWLASKLNPHLAKIPGLKKAGNRLQYGAENLPQILDQWARSNKHETGGMTDGLVRFLKANVRSASKLQTGVIKDAVQGMNEPSYFSRQSSKTLNEIIPGYLARMLRELQIIRTGDQNTEMVHYDFTKNRFDTHSNVKKNAFGALVDKDQKGWTRDQVEQLLDQVDGKKTLSPEQRRILGQQLLRNNVRGRLGGVEVLGKTNRYDGEAQQHGEQFSKLFRDYFKNDADSSKKHGFANAYNALGQFATASRDSVQDFSNLGMNDFLQESGILNEKGDAVDLEKFFEYYYGSEYNPGGNPAVPGQHTFSGQPIGGRSRPRRRQRSTARPQRPARPQIFMGGKAPETGLGGNDVQTLLGAIHGAVLRVDDGVKGLSGMIQSPDKEHSVFSQMLEKLTSMEQRIQAGVPTMIVGNVADGSIPAGAADVGGQKGKGWWWNRSIKDAAKGVAGGIWGGARKAGQFGNWLVGGGFGSVNKVTRFTAGLIGGQLGRVADKMRGFKDVYSESTGRKVLLYGQRLKAGEYFDVKTGKPIKTWKDIQGAVADESGIVMTEEQAATAYVREGLGKKALRGMGAIIKTGAKIGNSIGGSIFNALPRGWKLVSGAGGMVLKAATSYMNGPQDVYVHDASNPKKLRKALDAKTMRAGGYKSAVSDHPIKNPKDIDGAVVNYKGVEVLTDDEFKMGLYNKQGDPIKTGVSRLLGGVGRIAGAGVGALKWLAGGINQGIGNMFGLGKGFLSGLSGIFGRHGIFFGGGKKLMDTVSEIRDLLKERLPQQRKIRKGSIEDQHNQRREAEEEARRNAKDGDGDGKKRGGILSLLSGLFGKKKKKDDEDKDGKGGLVDDIESGVGQAIGERILGKIPGGKYLRKIPGLGRLFGKGGASAAAGAAEGAVAGAAKRGLGSRLLGGLKWGKGLGAGLALGGASALANATGHTTIGSGLGYAGDAATGWSVASGAASLLGIEGGALGLAGAAGGALLTGLGAIISSPVLLPALGIAATGAALYGGYKFLTRNKLDALSKIRYAQYGWKAEDNDYVSKVFGLESTLMPGVVYQGGMAQIDPKKVDLKKAVESFGVDLHDKDQVAAFTTWYLKRFKPVFITHLTILNGIKPGVSLGDVDSKLNAQEKQKYLAGIQMPSDPYNVMVSPVPGGKLSAGPDDVKAAIDDAKKSIDKDSKDDKDKKPTDALTKAGQVAGATAGLAAAGAVAGDAVKNLNAAASANQPTLAKPSGAGGAMGASVASAISPMNNAQVDAMEAIRFKTYGLKEMDSDKVHSLRQLEALVQKDVKVSKGKADWGGDVSELTAKIAPQFGFSGNRSNRAYDWMAWFHKRFLPTYLTYVSAVCSVTNQSDPAGAMKAIKPDDLLNAAKQVVSASTTAYGMATSVWQIPTSPWENYELNKESASTDGNMASLKQAQKAPALPEQAAFQKKTSAANDSKNTSQDAGPSAQSSWLDKLKSGVSNAWDATKAFAGKAWDATKSAAGAVGSAVAGAGAAVGNFASNVVSGAGDALKSGYNAAKGAAGRIGATISASASAIKNALISAMKTSGITDPKEQAMFMAQMDHESGGFKSLSENLNYRPSVLMSLFKGHFSGQQDAQQVASEGPEAIANRIYGGRMGNKDPGDGWKYRGRGVVQLTGKDNYIKFGKLTGLDLVNNPDLASDPMNAAKIAIAYWKNRVSSAAAKNGDVAAVTKAINGGYNGLQDRAAKFQTYLSQAASGALGGKPDPNAATQTAEGGAPGASGSTSGGVIKVADQTPGPAPATKGTTPTPSSTASSDASAAVSAQPDSIASQTQAVTGFQNRNKDLAAQNDYQNESLAKSLGPVTDVLKQSLTVQQGMLQALQQLVKMGGIMPGQKPSNTPTPSGGSASPDAMQRKNPQSMPTPPVSMSKMV
Physico‐chemical
properties
protein length:2239 AA
molecular weight: 236692,21950 Da
isoelectric point:9,57609
aromaticity:0,06521
hydropathy:-0,40464

Domains

Domains [InterPro]
DC_0124
STR
1–2196
DC_0124
Coil
Unmapped
1134–1154
Coil G3DSA:1.10.530.10
IPR023346
STR
1875–2063
IPR023346
IPR052354
Unmapped
1892–2056
IPR052354
IPR000726
ENZ
1969–2025
IPR000726
BDD79561.1
1 2239
Architecture
STR
STR 1-2196 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Burkholderia phage FLC9
[NCBI] 		2906467 No lineage information
Host Burkholderia glumae
[NCBI] 		337 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BDD79561.1 [NCBI]
Genbank nucleotide accession
LC667451.1 [NCBI]
CDS location
range 41931 -> 48650
strand +
CDS
ATGGCCAAACAGCAGAAGTTTACGTTGGATGATTTCTCATTCGACAAGAACTTGGATGTGCCTGATTTCGATTTCGACATCAAGCCGCCCAAGGACACACGCAAACCGATCATGAAGGTGGCGTCTGGCTTGAAGTCCGGCTTCTCGGCCGTTGCGTTGAGCAACGACTTTGCGCGGGACATGGTCAAGAAGGCGTTGCCCAAAGGGTTCGGTTCGGTGTATGACATCACCGAAAAGTCTGCGTCAAACCTGAAGAGTCTATACGATGACACGACCCGAGAGATCCGGCCGTTCATGAACGACTTGAAGCGCACCACGGCTCGTCTGCTTCCGAAAGTGGAAGAGGCGATGCCGAAGAAGGTGGCGCAGATGGTGAAAGACTGGACTGCGACGGCGGATCAGAACCCGAGTTCCCCCAACTACGACCCGCGCGAAGCTGAGATCAGCGCGCAGCTTGCCGGGATGGTGAAAGCCACTGCTTTGCTGCAACAAAAGCAAAGCGAAGACAACGATCAAAAGGACCGACTTCGTGAAGGCCTCGAACAAGTACGCCATCGGGACAAGCTTAAGCAGCTTGACCAAATGCGCCTTGGTATTATTCAGCTTGTGGATTACCAGGCCAACGTTACCGCTAACTACCACCGCAAGTCGCTCGAACTTCAGTACCGCCACTACTTTGTTGCTGTAGACGCGCTGGAGGAATCCAAGCGCAGCAATGCCGAGATGAAGGCAGCGCTCGCGGCGATCGTGCACAACACGGCTTTGCCGGAACAAGTCAAGCTGCATGCATCCGACACATTCAAGCAACTGGCCAAGAAGCAGATCGGCTCAGTGATTGGTAACACGATCTTCGGCCGTTCGAGCAACTTCATCGATACCCTCACCGGGAACCTGAAGAAGACCGCCTCGGCGCGCGTGAAGAACGCCGTGGGGCTTGGTCGAGGCGCACTGGGTGATGTGAATGCCGCGCTGGACGACATGGACCTGGCTGAGGCCATGGGCATGAAGACCGATCCGTACCATGCGGGTGGTCTGGCAGCAGGCGCGTTTGGTACCTCAGTGATTGGTGACTGGTTGGCCTCGAAGCTTAATCCGCACCTGGCCAAGATTCCGGGTCTGAAGAAGGCGGGTAACCGTCTCCAGTACGGGGCAGAGAATCTGCCGCAGATCCTGGATCAGTGGGCCCGCTCGAACAAGCATGAAACGGGTGGGATGACCGATGGCCTGGTGCGGTTCCTGAAGGCTAACGTCCGCTCGGCTTCCAAGCTGCAAACGGGTGTGATCAAGGACGCGGTTCAAGGCATGAACGAGCCGTCGTACTTCAGCCGTCAGAGTTCCAAGACCCTGAATGAGATCATTCCGGGTTATCTGGCTCGTATGCTGCGTGAACTGCAGATCATCCGTACGGGTGACCAGAACACGGAGATGGTCCATTACGACTTCACCAAGAATCGTTTCGATACGCATTCGAACGTGAAGAAGAATGCCTTCGGTGCTCTGGTGGATAAAGACCAGAAGGGCTGGACGCGTGACCAGGTGGAGCAGCTGCTTGATCAGGTGGATGGCAAGAAGACGCTCTCGCCTGAGCAACGTCGGATCTTGGGCCAGCAACTCTTGCGTAACAACGTCCGGGGTCGACTGGGTGGTGTGGAAGTGCTGGGTAAGACCAATCGTTACGACGGTGAAGCCCAGCAGCACGGCGAGCAGTTCTCCAAGCTCTTCCGTGACTACTTCAAGAACGATGCGGATTCGTCCAAGAAGCACGGCTTTGCTAATGCCTACAACGCACTCGGTCAGTTTGCGACTGCGTCGCGTGACTCGGTCCAGGACTTCTCTAACCTGGGCATGAATGACTTCTTGCAGGAGTCGGGCATTCTGAATGAGAAGGGTGATGCCGTGGATCTCGAGAAGTTCTTCGAGTATTACTACGGTAGCGAATACAATCCTGGTGGTAATCCGGCTGTGCCGGGTCAGCACACGTTCAGCGGCCAGCCCATCGGTGGCCGAAGCCGACCGCGTCGTCGGCAGCGCAGCACAGCCCGGCCGCAACGTCCGGCACGTCCGCAGATCTTCATGGGCGGCAAAGCACCGGAGACTGGCTTGGGTGGCAACGATGTCCAGACACTGTTGGGTGCGATTCATGGCGCGGTGTTGCGCGTCGATGATGGCGTCAAGGGTCTGTCGGGCATGATCCAATCGCCGGACAAGGAACACTCAGTCTTCTCCCAGATGCTCGAGAAGCTCACCAGCATGGAGCAACGTATTCAGGCCGGTGTGCCGACGATGATCGTAGGCAACGTCGCTGATGGTAGCATTCCGGCTGGCGCGGCGGACGTAGGTGGCCAGAAGGGCAAGGGCTGGTGGTGGAACCGTTCGATCAAGGATGCTGCCAAGGGTGTCGCCGGTGGTATCTGGGGCGGTGCCCGTAAGGCAGGTCAGTTCGGTAACTGGTTGGTCGGTGGCGGCTTTGGTTCGGTCAATAAGGTCACGCGCTTTACGGCGGGCCTGATTGGTGGCCAGTTGGGTCGTGTCGCAGACAAGATGCGCGGCTTTAAGGACGTGTACTCGGAATCAACCGGTCGCAAGGTACTGCTCTATGGCCAGCGTCTGAAGGCGGGTGAGTACTTCGATGTCAAGACGGGCAAGCCCATCAAGACGTGGAAGGACATCCAGGGTGCGGTCGCCGATGAGTCTGGCATCGTCATGACCGAGGAACAGGCCGCGACGGCTTATGTCCGTGAAGGACTGGGCAAGAAGGCGCTGCGGGGGATGGGTGCGATCATCAAGACCGGTGCTAAGATTGGTAATAGCATTGGGGGGAGCATCTTCAACGCCCTCCCTCGTGGCTGGAAACTGGTCTCGGGTGCGGGTGGAATGGTGCTCAAGGCCGCCACTTCGTACATGAACGGTCCGCAAGACGTGTATGTGCACGATGCCTCGAATCCGAAGAAGCTGCGTAAGGCGCTCGACGCTAAGACCATGCGTGCAGGCGGTTACAAGTCTGCGGTGAGCGATCACCCCATCAAGAACCCCAAGGACATTGACGGCGCTGTTGTCAATTACAAGGGTGTCGAAGTCCTGACGGACGACGAATTCAAGATGGGCCTGTATAACAAACAGGGCGACCCGATCAAGACCGGCGTGAGTCGTCTCTTGGGTGGCGTGGGCAGGATTGCAGGTGCTGGCGTAGGCGCGCTGAAGTGGTTGGCAGGCGGCATTAACCAAGGTATCGGCAACATGTTCGGACTGGGCAAGGGATTCCTCTCAGGACTCTCCGGCATCTTCGGCCGACATGGGATCTTCTTTGGGGGCGGTAAGAAACTGATGGATACCGTCAGTGAAATCCGTGACCTCTTGAAAGAGCGCCTGCCGCAACAGCGCAAGATCCGTAAGGGTTCGATTGAGGATCAGCACAACCAACGCCGGGAGGCGGAAGAAGAAGCACGGCGCAATGCCAAGGATGGTGATGGCGACGGCAAGAAGCGAGGCGGGATTCTCAGTCTGCTCTCAGGCCTCTTTGGCAAGAAGAAAAAGAAGGACGATGAAGACAAGGATGGTAAGGGCGGTCTCGTAGACGATATCGAATCCGGTGTCGGCCAAGCGATTGGCGAACGTATCCTCGGGAAGATTCCGGGTGGTAAGTATCTGCGTAAGATCCCTGGTCTGGGTCGTCTGTTTGGCAAGGGTGGCGCGTCCGCTGCCGCTGGGGCTGCAGAAGGTGCAGTGGCTGGTGCGGCCAAGCGCGGATTGGGCTCGCGGCTCTTGGGTGGATTGAAGTGGGGCAAGGGTCTCGGTGCGGGTCTCGCACTGGGTGGTGCTTCGGCACTGGCAAACGCCACGGGTCATACGACCATTGGATCGGGGTTGGGTTATGCAGGCGATGCTGCGACTGGCTGGTCTGTTGCTTCTGGGGCTGCTAGTCTACTCGGTATTGAGGGTGGAGCACTGGGTCTTGCAGGCGCTGCAGGAGGGGCGCTCCTTACTGGACTTGGTGCGATCATTTCTTCACCTGTGCTCCTACCTGCTCTCGGTATTGCAGCAACTGGGGCTGCGCTGTACGGGGGCTACAAGTTCCTGACGCGCAACAAGCTGGATGCACTCTCGAAGATCCGTTATGCGCAGTACGGCTGGAAGGCGGAGGACAACGACTACGTCAGCAAGGTCTTCGGACTGGAAAGTACGCTGATGCCGGGCGTGGTCTATCAGGGCGGCATGGCGCAGATTGATCCCAAGAAGGTCGATCTGAAGAAGGCCGTGGAAAGCTTCGGAGTGGATCTGCACGATAAGGACCAGGTGGCGGCATTTACCACGTGGTACCTGAAGCGCTTTAAGCCGGTGTTTATCACACACCTGACGATCCTGAACGGGATCAAGCCAGGGGTGTCGTTGGGAGATGTGGATAGCAAGCTGAATGCTCAGGAGAAACAGAAGTATCTCGCTGGGATTCAGATGCCGTCTGATCCGTACAACGTGATGGTTTCACCGGTGCCGGGCGGGAAACTGAGTGCGGGTCCGGATGACGTCAAGGCAGCGATCGATGACGCGAAGAAGTCGATCGATAAGGACAGCAAGGACGACAAGGACAAGAAGCCGACCGACGCGTTGACGAAGGCGGGGCAAGTCGCCGGTGCAACGGCGGGACTGGCAGCAGCTGGTGCGGTGGCAGGGGATGCAGTTAAGAACCTGAACGCCGCGGCGAGCGCCAACCAGCCGACACTGGCCAAGCCCTCGGGCGCAGGTGGGGCAATGGGCGCATCGGTCGCTTCGGCGATTTCACCGATGAACAACGCCCAGGTGGACGCCATGGAGGCCATTCGTTTCAAGACGTATGGCCTTAAGGAAATGGACAGCGATAAGGTTCACTCCTTGCGTCAATTGGAAGCGCTGGTACAGAAGGACGTCAAAGTCTCTAAGGGTAAAGCCGACTGGGGTGGCGATGTCTCGGAGCTGACCGCAAAGATCGCACCGCAGTTTGGCTTCTCGGGCAACCGGAGCAATCGCGCGTACGATTGGATGGCCTGGTTCCACAAGCGTTTCTTGCCGACCTACCTGACCTACGTGTCAGCGGTGTGTTCGGTCACCAACCAATCTGATCCGGCCGGGGCGATGAAGGCAATCAAACCGGATGACCTGCTTAATGCAGCCAAGCAAGTGGTCAGTGCCTCGACGACGGCTTACGGCATGGCGACCTCGGTCTGGCAGATTCCGACTTCACCGTGGGAAAACTACGAGTTGAATAAGGAGTCGGCCTCAACCGACGGTAACATGGCGAGCCTGAAGCAAGCGCAAAAGGCACCGGCGCTGCCGGAGCAGGCGGCCTTCCAAAAGAAGACGTCGGCTGCCAATGACTCGAAGAACACGAGTCAGGATGCCGGTCCCTCCGCACAATCGAGTTGGTTGGACAAGCTGAAGTCAGGCGTGTCGAATGCGTGGGATGCGACCAAAGCCTTTGCAGGTAAGGCCTGGGATGCGACCAAGTCGGCAGCAGGGGCGGTGGGGAGCGCGGTAGCGGGTGCAGGTGCCGCTGTCGGGAACTTTGCGTCCAATGTGGTGTCGGGCGCGGGCGATGCCCTGAAGTCGGGCTACAATGCGGCTAAGGGGGCAGCAGGCAGGATCGGTGCGACGATTTCGGCTTCGGCCAGTGCAATCAAGAATGCCTTGATTAGCGCGATGAAGACGTCGGGCATTACCGATCCGAAAGAGCAGGCGATGTTCATGGCACAGATGGACCATGAGAGTGGGGGTTTTAAGTCACTCTCGGAAAATCTGAACTACCGACCCTCAGTACTGATGAGTCTCTTCAAGGGACACTTCAGTGGTCAACAGGATGCCCAGCAGGTGGCCTCGGAAGGTCCGGAAGCGATTGCTAACCGGATTTACGGCGGTCGCATGGGGAACAAAGATCCGGGTGACGGTTGGAAGTATCGGGGACGTGGTGTGGTGCAATTGACCGGTAAGGACAACTACATCAAGTTCGGTAAGCTGACGGGGTTGGATCTGGTGAATAACCCGGACCTCGCCAGCGATCCGATGAACGCGGCCAAGATTGCCATTGCGTACTGGAAGAACCGAGTCAGTTCGGCAGCCGCCAAGAACGGTGACGTGGCAGCCGTCACGAAGGCCATCAATGGCGGTTACAACGGCTTGCAGGATCGGGCCGCGAAATTCCAGACGTACCTGTCTCAGGCAGCCAGTGGTGCATTGGGTGGTAAGCCTGATCCGAATGCCGCGACGCAAACGGCAGAGGGTGGCGCACCTGGTGCATCGGGTAGCACAAGCGGTGGCGTGATCAAGGTGGCGGATCAAACCCCTGGGCCGGCTCCGGCCACCAAGGGCACGACGCCGACGCCGTCATCCACCGCGTCCAGCGACGCGAGTGCAGCTGTCAGTGCGCAGCCGGACTCTATCGCGTCTCAGACTCAGGCCGTGACGGGCTTCCAGAATCGCAACAAGGATCTGGCTGCACAGAACGACTATCAGAATGAGAGCCTGGCCAAGTCGTTGGGTCCGGTGACAGATGTGCTCAAGCAATCACTGACGGTGCAACAGGGCATGCTGCAAGCTCTGCAACAGTTGGTGAAGATGGGTGGGATCATGCCGGGCCAAAAGCCTAGCAATACTCCGACGCCGTCTGGCGGTAGCGCTTCGCCTGATGCTATGCAACGCAAGAACCCGCAGTCCATGCCGACGCCTCCGGTGTCGATGAGCAAAATGGTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
060f64137adb431a9bc78f9c70ce24e6084971753798c0779f30bade23cf4da3
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,4918
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Optimal preservation method of new biocontrol agent Burkholderia jumbophages having a potential suppressing rice seedling rot disease Kanaizuka,A., Sasaki,R., Miyashita,S., Ando,S. and Takahashi,H. 2022-11-19 — GenBank