Protein

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Genbank accession
YP_004323157.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,85
Protein sequence
MSTINVGSVQGSPTVTGDLTVSGTIKSSGVRHPSANTDAISAAADGTVTVAGVVKTTAIQDLSGNTLGGGQVLQVVQRVSNSYGEFGNSSYQNNINNLTAIGDWYIDITTTKANSKILCQWKTKMYGPNTQHQYVDLRRRIGSGGFTSLVDAYRSNSTIDTFAGIHWQNGNGAFEGDYFSAFIDTPNQPAGTSLRYQQYLGGWAGGTIDFGGWDANNNQNARGMIVMICYELAP
Physico‐chemical
properties
protein length:234 AA
molecular weight: 24899,17620 Da
isoelectric point:5,84097
aromaticity:0,09402
hydropathy:-0,28248

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Prochlorococcus phage P-RSM4
[NCBI] 		444862 Uroviricota > Caudoviricetes > Pantevenvirales > Thaumasvirus > Thaumasvirus stim4
Host Prochlorococcus marinus str. MIT 9303
[NCBI] 		59922 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae > Prochlorococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_004323157.1 [NCBI]
Genbank nucleotide accession
NC_015283.1 [NCBI]
CDS location
range 17167 -> 17871
strand +
CDS
ATGTCAACGATTAATGTAGGATCCGTTCAAGGCAGTCCAACGGTAACAGGTGATTTAACTGTCAGTGGAACAATTAAATCGTCTGGCGTCCGACACCCATCTGCTAACACAGATGCAATTTCTGCTGCTGCGGACGGAACGGTGACTGTGGCAGGTGTTGTTAAGACAACTGCAATTCAAGATTTATCAGGTAATACGCTTGGTGGTGGTCAAGTTTTACAAGTTGTTCAAAGGGTTAGTAACTCATATGGTGAGTTTGGTAACTCAAGTTATCAGAACAACATTAATAACTTAACTGCTATTGGTGATTGGTATATTGACATTACGACTACAAAAGCAAACTCTAAGATTTTGTGTCAGTGGAAAACTAAGATGTATGGTCCTAACACTCAGCACCAATACGTTGACTTAAGAAGAAGAATCGGTAGTGGTGGTTTTACTTCATTAGTTGATGCTTATAGATCAAATAGCACTATTGATACATTTGCAGGAATTCACTGGCAAAATGGTAACGGTGCTTTTGAAGGAGACTACTTCTCAGCATTCATTGATACACCAAACCAACCTGCAGGTACGTCACTTCGTTACCAACAATACCTTGGAGGTTGGGCAGGAGGAACTATCGACTTCGGTGGTTGGGATGCTAACAACAACCAGAACGCTCGTGGTATGATTGTTATGATCTGCTATGAACTTGCACCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b509a85737eee4d17a69366ffe9d15beb97b8ae3cfbab095da3e6143e971761f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7102
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage 9303-10a Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Erlich,R., Young,S.K., Koehrsen,M., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C., Galagan,J. and Birren,B. 2011-09-23 — GenBank