Protein

View in Explore
Genbank accession
YP_004421486.1 [GenBank]
Protein name
structural protein
RBP type
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MADLTARIKPKKSSTTGEVPQASDLEVAELAVNTADGKLFVKHTDNSIKEISGGVDSVNGEIGVVSLGVVDMNDYSPRYVSADPAWLMSTTFTNSTQFTGDGQGFLTGGGTVYVYLRKVDADGIDRTSQLMGLQIGDSLTFSWNGGANTNVKDVFGEAPTEYTDFVRIRVNNSTESWSDNQRVEISGGTLSATPTEVPKATGDLLTWNSVTSKFEPTPKLLATVATTGAYSDLSGTPTLVTSINDLTDVDTTTAAPTTGQLLEWDGANWVPGDAPAGAVSSVNGETGVVSLGVQDMDDFKLNQVFGGLSWAGYSSSGNSALTSNEWWSNQFNLIVSPVTTAGDQTSALLGMTGEIILTDASNATFSFTPTNITSDNNGSGGAPRILIAGIGATIDGAINKSGGLTISNITFGALDVPLAEGEILLWNSTESKFKPQAIATVATSGSYNDLANLPTLVTSIDGLTDVDTSTAAPTDGQVLTWDNANGQWEPATPSGSIQTASDFELNPAGTDLTWSTCLGATTISNDPPGSWGAFESGGETTISIEEASDQGDVTAKLQAIQVNDVIAVNGTNRTVVSKSDFLSLQGEMRLSFAGVGYIDNTAGANTLTLSAAQFATGTTPLADGDILQYVAADSAFKPAQIPVDSNIAQAGTGANAINNLVTISQVDYDALGTPDANTVYFIV
Physico‐chemical
properties
protein length:683 AA
molecular weight: 70792,88260 Da
isoelectric point:4,05003
aromaticity:0,07028
hydropathy:-0,08712

Domains

Domains [InterPro]
DC_0755
ATT
31–415
DC_0755 DC_1461
IPR056923
RBD
659–683
IPR056923
YP_004421486.1
1 683
Architecture
ATT
STR
ATT 31-415 | STR 437-683
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-CBS2
[NCBI] 		753084 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. CB0204
[NCBI] 		232353 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_004421486.1 [NCBI]
Genbank nucleotide accession
NC_015463 [NCBI]
CDS location
range 25127 -> 27178
strand +
CDS
ATGGCTGACCTCACTGCTCGTATTAAGCCGAAGAAGAGCAGCACGACTGGTGAGGTGCCCCAGGCTTCGGATCTGGAAGTTGCAGAACTTGCTGTAAACACTGCAGACGGCAAGCTGTTTGTTAAGCACACCGATAATTCGATCAAGGAGATCAGTGGTGGCGTTGACAGTGTTAATGGTGAAATAGGCGTCGTGTCCCTTGGTGTCGTGGACATGAACGACTATTCTCCTCGTTATGTGTCTGCAGATCCAGCCTGGTTAATGAGTACAACTTTCACTAACAGTACACAATTTACTGGTGACGGGCAAGGCTTCCTTACGGGAGGTGGTACTGTTTACGTGTATCTCAGAAAAGTAGACGCCGACGGTATTGACAGAACCTCTCAACTCATGGGGCTTCAGATCGGCGATAGCCTCACTTTCTCTTGGAACGGTGGGGCCAATACTAACGTCAAAGACGTTTTCGGAGAAGCGCCTACAGAGTATACTGATTTTGTAAGAATTAGGGTCAATAACTCTACGGAAAGTTGGAGCGATAATCAGCGGGTTGAGATTAGCGGCGGCACTTTATCGGCAACACCTACCGAGGTCCCGAAAGCTACTGGGGATTTGTTGACCTGGAATAGCGTCACAAGCAAATTTGAGCCAACGCCAAAGCTGCTAGCCACGGTAGCCACGACTGGCGCATATTCTGATCTGTCTGGTACACCCACTCTTGTCACGAGTATCAATGATTTAACAGACGTTGACACTACCACCGCTGCGCCTACTACTGGTCAGTTGCTCGAATGGGACGGCGCCAACTGGGTTCCTGGCGATGCGCCTGCTGGCGCTGTTAGCAGTGTTAATGGTGAAACAGGCGTCGTGTCCCTGGGCGTTCAGGACATGGATGACTTTAAGCTGAACCAAGTTTTCGGAGGGCTTTCCTGGGCTGGTTACTCTTCTTCGGGAAATTCTGCTTTGACCAGCAACGAATGGTGGTCAAACCAATTCAATTTGATTGTCTCTCCAGTCACGACAGCAGGCGATCAGACTTCAGCCCTGCTGGGAATGACTGGCGAAATCATTTTGACCGACGCCTCTAACGCTACTTTTTCATTTACGCCAACAAACATAACTTCTGATAACAATGGATCTGGAGGAGCTCCTAGAATCCTGATAGCTGGTATTGGCGCGACTATCGATGGCGCTATTAACAAGTCGGGCGGGCTGACTATCTCGAATATAACCTTTGGCGCGCTTGACGTACCTCTTGCTGAAGGCGAGATTCTTCTGTGGAACAGCACTGAAAGCAAATTCAAGCCGCAAGCGATAGCCACGGTGGCAACAAGTGGCTCTTACAATGACCTGGCTAACTTGCCTACCCTTGTCACGAGCATTGATGGCCTGACAGACGTAGACACTTCCACGGCGGCGCCTACGGACGGCCAAGTCTTGACATGGGACAATGCCAACGGTCAGTGGGAGCCCGCAACCCCTTCTGGAAGCATCCAGACCGCAAGCGACTTCGAGTTAAATCCTGCTGGTACCGATCTTACTTGGTCTACTTGTCTTGGCGCTACTACAATTTCAAATGATCCGCCTGGAAGTTGGGGGGCATTTGAATCAGGTGGAGAGACGACTATTTCAATCGAAGAAGCATCAGACCAGGGTGATGTTACGGCAAAGCTTCAAGCGATTCAGGTCAATGACGTTATTGCGGTTAACGGTACAAATAGGACAGTTGTTTCTAAATCTGATTTTCTTAGCCTACAAGGCGAGATGAGATTATCATTTGCCGGAGTTGGTTACATAGATAATACGGCTGGTGCTAATACGCTCACTCTTTCTGCTGCACAATTCGCTACTGGAACCACCCCCCTGGCTGATGGCGATATCCTGCAATATGTTGCAGCCGACTCCGCGTTCAAGCCCGCGCAGATCCCAGTTGACTCCAACATTGCCCAGGCTGGCACGGGTGCCAACGCCATCAACAACCTCGTAACCATCTCTCAGGTAGACTACGACGCGCTCGGCACTCCTGACGCCAACACCGTTTACTTTATCGTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9be619f1e7726afece79819392ff1b32980a1d99d32328aeb124618380f55be7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5970
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50