Protein

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Genbank accession
YP_009600045.1 [GenBank]
Protein name
regulator of chromosome condensation
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MLPFPIISNTHIIVKVSIVKYVGANGYYLALSNTGNVYSYGTNANGQLGLGDTTQRTTWTLSATGVDDIYLNRNSNTYTSIIRKGKKLLYSGKRGAIIGDSSVSTQVLTWTEFYDLSTLTSDGSTVTDIQSSTGSIGVLLSNKNLYLTGTNLGTGSTSISPVLTLSSSNVDSFSINSTNTYIVRGSELFGTGSNAQLQISNSGTSFSTYTSITTSVSFALGGINNVYIVLLNGEIWGRGQNALISLGLSGSTGNRGLTKLMNTLILLPAKIHCWGYGAAVIGSDGIWGCGQTLYSGSSSSNQTVWTKYYPITSFSGSLIDLTGTNTSTVLHTSTGIYGAGSDLLVNQGTSISYYKLEQPK
Physico‐chemical
properties
protein length:360 AA
molecular weight: 37988,02100 Da
isoelectric point:8,86190
aromaticity:0,09167
hydropathy:0,02667

Domains

Domains [InterPro]
DC_0433
ATT
1–125
DC_0433 DC_1778 DC_2125
IPR009091
STR
3–264
IPR009091
IPR009091
STR
18–313
IPR009091
YP_009600045.1
1 360
Architecture
ATT
STR
RBD
ATT 1-125 | STR 126-313 | RBD 314-360
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009600045.1
1 360
Domain Start End Length (AA) Confidence
N-terminal 1 112 112 0,1716
Central domain 113 315 204 0,3553
C-terminal 316 360 44 0,4287
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-112
Central
113-315
C-terminal
316-360

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage BF
[NCBI] 		1962671 Uroviricota > Caudoviricetes > Eneladusvirus >
Host Serratia marcescens
[NCBI] 		615 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009600045.1 [NCBI]
Genbank nucleotide accession
NC_041917 [NCBI]
CDS location
range 355754 -> 356836
strand -
CDS
ATGTTACCATTTCCAATAATAAGTAATACACATATAATAGTGAAGGTATCTATTGTAAAATACGTTGGTGCTAATGGATATTATCTTGCTTTAAGTAACACAGGAAATGTATACTCTTATGGTACAAATGCCAATGGTCAATTAGGATTAGGTGATACCACACAGAGGACTACATGGACATTGAGTGCAACTGGAGTGGATGATATATATTTGAATAGGAACTCCAACACATACACATCTATAATACGTAAGGGGAAGAAGCTCCTATACAGTGGTAAGAGGGGTGCAATAATAGGTGATAGTTCTGTATCTACTCAAGTACTGACATGGACAGAGTTTTATGATTTAAGCACCTTAACCTCAGATGGAAGTACTGTTACAGATATACAGAGTAGTACTGGTAGTATAGGAGTATTATTAAGTAATAAAAATTTATATTTAACTGGTACAAATTTAGGTACAGGAAGTACATCGATAAGTCCAGTACTAACGTTGAGTTCTAGTAATGTAGATTCATTTAGTATTAACAGTACCAACACTTATATAGTACGGGGTTCAGAATTATTTGGTACTGGTTCAAATGCACAGTTACAGATTTCTAACAGTGGTACATCATTTAGTACTTACACTAGTATAACGACTTCTGTATCATTTGCATTAGGAGGAATTAACAATGTATATATAGTACTTCTTAATGGAGAGATATGGGGCAGGGGTCAGAATGCATTAATATCTTTAGGTTTAAGTGGAAGTACAGGTAATAGGGGTTTAACGAAGTTAATGAATACTTTAATACTGTTACCTGCTAAGATACATTGTTGGGGATATGGAGCAGCGGTGATTGGAAGTGATGGTATATGGGGATGTGGGCAGACTTTATATTCTGGAAGTTCTTCATCGAATCAGACGGTTTGGACGAAGTATTATCCTATTACATCTTTTAGTGGATCATTAATTGATTTAACTGGTACAAACACGAGTACGGTATTGCACACGAGTACTGGAATATATGGAGCGGGTTCTGATTTATTAGTTAATCAGGGTACTTCTATATCGTACTATAAGTTAGAGCAGCCGAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
579f1231a2339f5fd210d00519613153fb075d8f9d9b3f89dcf9fbac5fbccc49
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8633
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome sequence of Serratia marcescens phage BF Casey,E., Fitzgerald,B., Mahony,J., Lugli,G., Ventura,M. and van Sinderen,D. — — GenBank