Protein

View in Explore
Genbank accession
WNT48322.1 [GenBank]
Protein name
colanic acid degradation
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MADLLPTVKVSDLPTATDSFEGDFLVVDQSDATRKSTWSNVFSRFGIMRLFSFQDGGTLISAKDQVIDRSTNKIYQWTGAYPKLVPANSTPESTGGVGTGGWSVNDPALRGDLAGPSGSSYVGGPAGTVAQSLDGFVTPSQFVGKYPTTTEAVTAMVAYAKANKKAVLAWGWNLVLETSVYIDGVEWYGGSFNQSGGNRYMYLSNSTFRWVTFTGVCTRHYGGRLIITDSSWVNNTNTAAMLLQALPIDGTIDILDSDFRGCKYGILQQGTGALITRARFARLNFNDLTGDAIECNVVNRHYKAGGLTIEDINIDNINNTDNSPNWGIGIGVAGQGPYGANASDDQYVSGIIIRNVKMRRVRQCIHFELCRDFKVENVEVYPDASVSNGTLLASGGVVCYGSKDFIIDGVRGEMVNGATRFIYFGWGVNAGVYAAPCRDFTLRNVRSHTGLVDVPVSAADDWTNTVTIEDVECDTFKYRGLVSRLRLANIRCNKFDGIGDYEAGQGEAGGAMKRWAWCSAEILNITSLDSNGVANGNFGQVGFDHLTTYGCNFDVVQHSKTNGNRGVTLLNAGNIYIADNDLFPQGKEFVKGDIILKKTGGLFVVETGGSYIEPNDYIKATTVGSKTIQCAADSGVSQPWATRAFKSAGLQLTIPGAGAGGSDLKTTVIRAPYQKGAWTTPFYLDIADPIQTATPDNTALVSTNPVVYSERT
Physico‐chemical
properties
protein length:712 AA
molecular weight: 76612,88710 Da
isoelectric point:5,38654
aromaticity:0,10112
hydropathy:-0,15253

Domains

Domains [InterPro]
DC_1918
ATT
1–330
DC_1918 DC_0045
G3DSA:2.10.10.80
ATT
47–115
G3DSA:2.10.10.80
IPR040775
RBD
52–103
IPR040775
WNT48322.1
1 712
Architecture
ATT
RBD
ATT 1-330 | RBD 410-712
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WNT48322.1
1 712
Domain Start End Length (AA) Confidence
N-terminal 1 147 147 0,9920
Central domain 148 580 434 0,9947
C-terminal 581 712 131 0,9317
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-147
Central
148-580
C-terminal
581-712

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SPLA5a
[NCBI] 		3077601 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WNT48322.1 [NCBI]
Genbank nucleotide accession
OR413583 [NCBI]
CDS location
range 127617 -> 129755
strand -
CDS
ATGGCAGATCTATTACCTACCGTCAAGGTCTCAGACTTACCGACTGCGACGGACTCTTTCGAGGGAGATTTCCTGGTTGTTGACCAATCAGATGCAACACGTAAGTCTACGTGGTCGAATGTCTTTTCTCGTTTTGGCATCATGCGCCTATTCTCCTTCCAGGATGGTGGGACGCTGATTTCAGCGAAGGACCAGGTAATTGACCGCTCAACCAACAAGATTTACCAGTGGACAGGTGCATACCCTAAACTGGTTCCAGCCAACTCTACCCCGGAAAGTACCGGGGGTGTTGGTACTGGAGGCTGGTCTGTTAATGACCCAGCCCTTCGTGGCGATCTTGCAGGTCCGAGTGGCTCAAGTTATGTTGGTGGCCCAGCCGGGACTGTGGCACAATCCCTCGACGGGTTTGTAACCCCTTCCCAGTTCGTTGGGAAATATCCTACCACAACCGAGGCTGTGACCGCAATGGTCGCCTATGCAAAGGCCAACAAGAAAGCTGTTTTGGCGTGGGGATGGAATCTTGTTCTTGAAACAAGTGTTTACATCGACGGGGTAGAGTGGTATGGCGGAAGCTTTAACCAGTCTGGCGGGAACAGATATATGTACCTGTCGAACAGTACATTCCGTTGGGTAACGTTCACGGGTGTCTGTACACGACACTACGGTGGTCGCTTGATCATCACTGACTCTTCATGGGTTAATAACACAAACACTGCTGCAATGCTGTTGCAGGCTCTCCCTATTGATGGTACTATCGACATTCTGGACAGTGATTTCCGTGGATGTAAATATGGTATCCTCCAACAAGGTACAGGTGCGCTTATCACCCGCGCTCGGTTTGCCCGTCTTAACTTTAATGATTTGACAGGGGATGCAATTGAGTGTAACGTTGTTAACCGTCACTACAAGGCAGGTGGTCTGACCATCGAAGATATCAACATTGACAATATCAACAACACAGACAACTCTCCTAACTGGGGTATTGGTATTGGTGTTGCGGGTCAGGGTCCATACGGTGCTAACGCCTCGGATGACCAATACGTCAGCGGGATTATTATCCGTAACGTCAAAATGCGTCGTGTACGTCAGTGTATCCACTTCGAACTTTGCCGAGATTTCAAGGTGGAGAACGTAGAGGTTTATCCTGATGCCTCCGTATCTAACGGGACGCTTCTTGCATCTGGCGGTGTTGTGTGTTACGGCTCCAAAGACTTCATCATTGATGGTGTTCGAGGAGAGATGGTGAACGGAGCCACGCGCTTCATCTACTTCGGCTGGGGTGTTAACGCAGGTGTTTATGCTGCTCCTTGTCGTGACTTCACACTGAGAAACGTGCGTAGTCATACAGGGCTTGTTGATGTACCTGTTTCCGCTGCCGATGACTGGACAAACACGGTCACAATTGAAGATGTTGAATGCGACACCTTCAAGTACCGAGGTCTTGTATCCCGTCTTCGTCTTGCCAATATCCGCTGTAACAAGTTTGACGGCATCGGTGATTACGAAGCAGGTCAGGGTGAGGCAGGTGGCGCTATGAAGCGTTGGGCTTGGTGTTCTGCTGAGATCCTCAACATCACGAGCCTGGACTCCAATGGTGTTGCCAATGGCAATTTCGGTCAGGTAGGCTTTGACCATCTGACTACCTACGGATGTAATTTCGATGTTGTACAACATTCGAAGACAAACGGAAACCGTGGGGTGACATTGCTTAATGCGGGTAATATCTACATCGCTGACAATGATCTTTTCCCACAAGGGAAGGAGTTCGTAAAAGGTGATATCATCCTCAAGAAGACTGGGGGGTTGTTTGTTGTTGAGACAGGAGGTTCATACATTGAGCCAAATGACTACATCAAGGCAACAACCGTTGGTTCTAAGACAATTCAGTGTGCAGCAGATTCTGGAGTGAGTCAGCCTTGGGCTACTCGTGCTTTCAAATCTGCGGGTCTGCAACTGACAATCCCCGGCGCTGGCGCTGGAGGTTCAGATCTTAAAACGACCGTTATTCGCGCCCCGTACCAAAAGGGTGCTTGGACAACCCCGTTCTACTTGGATATCGCTGACCCTATTCAGACGGCAACGCCTGATAATACAGCACTTGTTTCAACAAACCCGGTAGTATACAGCGAAAGGACTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2e38b162f9990212e7415297dd7fead3d02f3969e53efe1280312028fed41d1a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7254
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Collateral sensitivity increases the efficacy of a rationally designed bacteriophage cocktail to control Salmonella enterica Acton,L.J. 2024-03-19 — GenBank