Protein

View in Explore
Genbank accession
AUR99398.1 [GenBank]
Protein name
coil containing protein
RBP type
TF
Evidence RBPdetect
Probability 0,77
Protein sequence
MSLIGINSSSGGAGFELGPAQNVFTGADRTAAELERDTYTTANPSWLAEYEVATGVKPNIRLEFLDGTEQAVAYQVRNSAGTAWADNESFLAIKGNTGDSDISNVEDGQIPVKDGETLVSSGMQKLPDGQILAPKNFGVESASIDFGDVITVSEQSSFLGIRDNSNGQSYIVVDFERNRDEPSRSPRIFTSTEAEVTEVVQSDDSTELTGTSLTFDYTTTITAYTNAITLRAQSEMTNVRIKITPSGGAVGLKYIPQKSSWISETEGLTLTAGDNEIDLFDSSLALESGTTLTVEIRADAISLLGTATGIPYLAVKKQDANFKSLVVKGAPVGVLGGETLEVQPNSSISAAFSDPATTETITLNLDNGNHSGDAIEFVFANNLGTNTVVFNASSDIGFFNTNSNTFVFSPQLTLTGRSARVIFEWYGNDWRIVR
Physico‐chemical
properties
protein length:434 AA
molecular weight: 46343,46240 Da
isoelectric point:4,29438
aromaticity:0,08065
hydropathy:-0,18433

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.265.O._10N.286.52.F6
[NCBI] 		1881274 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio cyclitrophicus
[NCBI] 		47951 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR99398.1 [NCBI]
Genbank nucleotide accession
MG592630 [NCBI]
CDS location
range 12554 -> 13858
strand +
CDS
ATGAGTTTAATTGGAATTAATAGCAGCTCTGGTGGTGCAGGGTTTGAGCTTGGTCCAGCGCAGAATGTTTTCACCGGTGCGGATAGAACAGCCGCTGAACTAGAGCGAGACACTTACACGACCGCGAATCCCTCATGGCTTGCTGAGTATGAAGTTGCGACAGGCGTTAAGCCTAACATCCGTCTAGAGTTCTTAGATGGCACGGAGCAGGCTGTAGCATATCAGGTTAGAAATAGCGCTGGCACTGCATGGGCTGACAATGAAAGCTTTCTAGCAATTAAGGGCAACACTGGCGACTCTGATATTAGCAATGTTGAAGATGGCCAGATACCAGTAAAAGACGGCGAGACCCTTGTTTCTTCTGGTATGCAGAAGTTACCTGACGGGCAGATTCTAGCGCCTAAGAATTTTGGTGTTGAGTCTGCATCAATTGACTTTGGTGACGTAATCACGGTGTCTGAGCAAAGCTCTTTCTTGGGAATTAGAGATAACTCAAACGGTCAAAGCTACATAGTTGTGGACTTTGAGAGAAACCGTGATGAGCCATCTCGAAGTCCTCGTATATTTACATCTACGGAGGCTGAAGTTACGGAAGTGGTGCAGTCTGACGACTCAACAGAGTTAACTGGTACGTCGCTAACATTCGACTACACAACCACCATTACAGCCTATACAAACGCAATTACACTTCGAGCTCAGTCAGAGATGACCAACGTTCGAATTAAAATTACACCTTCAGGCGGTGCGGTAGGCTTAAAGTACATCCCACAAAAGTCATCATGGATATCAGAAACTGAAGGCTTAACGCTAACCGCTGGCGATAATGAGATCGACTTGTTTGACTCATCACTTGCTTTAGAGTCCGGAACCACGCTAACTGTAGAAATTCGAGCTGATGCAATCTCGCTGCTTGGTACGGCGACGGGCATTCCATACCTAGCTGTTAAGAAGCAAGATGCCAACTTTAAATCACTTGTTGTCAAGGGCGCTCCAGTCGGCGTATTGGGTGGCGAAACTCTGGAAGTTCAACCAAACTCTAGCATTAGTGCGGCATTTTCCGACCCTGCGACAACAGAAACAATTACGTTAAACTTAGACAATGGAAACCACTCTGGGGATGCAATTGAATTTGTATTCGCTAACAATCTAGGCACAAACACAGTTGTGTTCAACGCGAGTTCAGATATTGGATTCTTTAACACGAACAGCAACACGTTTGTATTTTCACCTCAACTAACGCTTACGGGGCGTTCTGCTAGGGTTATTTTTGAATGGTATGGCAATGATTGGAGGATTGTACGATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
6e4ecc089d992a0055bdd39de039c6c60ec7570cecc4ec286e7002992f84c888
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5711
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank