Protein

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Genbank accession
XHB37878.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MINFNQLETLNKCLIDWNVNYSVYPYNGYTVNEVLCQFFDAINKGIITINEYTNLITGVLNWIKEEGLKEEVEKELDKWLQDGTLENIINHKLLGDILEQISDLEDVDNNLKEGLKDLLNNFEEFKKENEKNLLDIKKELKEQRNFMENITFVCYSREGIGACVNKAIADGYRTIKIAPGDYVLDEPIILKDNLELYGSKNTIITNSLDAPAIKTSGVYNEFVSNCYIHDLHLIKAKATQYWHLDLCNLNMSKVERVRCEMADVYPMDVVGGLYVYYNGEYVGEEGAYSLNMEKLDFRSCSVKIGITDCYLSNSNIWGKNRKYALWIASSSQQISNCQFVGGAWAGGIYIKNESNYDVEIIKISNCYFDGSYPGLDTYAGIYAEKLRSSTITGNTFWRQKDCGLILVDAKANTITGNTFEDNGIKNLKQGEQNVPGGLYDIKFTGIMESNVVSNNTFASYDNFYIKPKAIDVSAVSSWNNNVLTNNIIFNNGHYDSSPFNGFTSLGSNTLQTNGCYGSWLENHDGTSS
Physico‐chemical
properties
protein length:528 AA
molecular weight: 59662,30830 Da
isoelectric point:4,76324
aromaticity:0,11364
hydropathy:-0,34527

Domains

Domains [InterPro]
DC_0396
ATT
1–235
DC_0396 IPR039448
Coil
Unmapped
108–128
Coil IPR012334
IPR011050
STR
162–515
IPR011050
IPR039448
ENZ
309–490
IPR039448
IPR022441
Unmapped
380–423
IPR022441
XHB37878.1
1 528
Architecture
ATT
STR
ATT 1-235 | STR 236-515 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XHB37878.1
1 528
Domain Start End Length (AA) Confidence
N-terminal 1 159 159 0,9944
Central domain 160 517 359 0,9925
C-terminal 518 528 10 0,5188
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-159
Central
160-517
C-terminal
518-528

Taxonomy

  Name Taxonomy ID Lineage
Phage Clostridium phage vB_CpeB_CP1
[NCBI] 		3317305 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Clostridium perfringens
[NCBI] 		1502 cellular organisms > Bacteria > Bacillati > Bacillota > Clostridia > Eubacteriales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XHB37878.1 [NCBI]
Genbank nucleotide accession
PQ241118.1 [NCBI]
CDS location
range 10460 -> 12046
strand +
CDS
ATGATTAATTTTAATCAACTTGAAACATTAAATAAATGTCTTATAGACTGGAATGTTAATTATTCTGTATATCCGTATAATGGTTATACAGTAAATGAAGTATTATGTCAGTTTTTCGACGCGATTAACAAGGGTATTATAACTATAAATGAATATACTAATTTAATTACAGGCGTATTAAACTGGATTAAGGAAGAAGGTTTAAAGGAAGAGGTTGAAAAAGAACTTGACAAATGGTTACAAGACGGAACTTTAGAAAATATAATAAATCATAAATTATTAGGGGACATATTGGAACAAATTTCAGACCTTGAGGACGTTGACAACAATTTAAAAGAGGGATTAAAAGACCTGTTAAATAATTTTGAAGAGTTCAAAAAGGAAAACGAGAAAAATTTACTTGACATTAAAAAAGAACTTAAAGAACAAAGAAACTTCATGGAGAATATTACATTCGTTTGTTATTCTAGGGAAGGTATAGGAGCATGTGTTAATAAAGCTATTGCCGACGGTTATCGTACTATAAAAATAGCACCTGGAGATTATGTGTTAGATGAACCAATTATACTAAAAGATAACCTAGAATTATACGGTTCTAAGAACACTATTATTACTAATAGTTTAGACGCTCCCGCTATAAAAACAAGTGGCGTGTACAATGAATTTGTTAGCAACTGTTATATTCACGATTTACATTTAATAAAGGCTAAGGCTACTCAATATTGGCATTTAGACTTATGTAATTTAAATATGAGTAAGGTTGAACGTGTTCGTTGTGAAATGGCAGACGTGTACCCTATGGACGTTGTCGGCGGACTTTACGTTTATTATAACGGTGAGTACGTTGGAGAAGAGGGAGCATATTCTCTTAACATGGAAAAACTAGACTTTAGAAGTTGCTCCGTAAAAATTGGTATTACAGATTGTTACTTATCTAATTCAAACATATGGGGTAAGAACAGAAAGTATGCTTTATGGATAGCGTCAAGTTCTCAACAAATTTCAAATTGTCAATTTGTAGGTGGTGCCTGGGCGGGTGGTATTTACATCAAAAATGAAAGCAACTATGATGTTGAGATTATAAAAATTTCCAACTGTTATTTTGACGGTTCTTATCCTGGACTAGATACCTATGCGGGTATATATGCAGAAAAATTAAGAAGTTCAACAATTACTGGCAATACTTTTTGGAGACAAAAAGACTGTGGTTTAATATTAGTTGACGCAAAGGCTAATACAATAACAGGTAATACCTTTGAGGACAACGGAATTAAGAACTTAAAACAGGGAGAGCAAAATGTTCCAGGTGGTTTATATGACATTAAATTTACTGGTATTATGGAAAGTAATGTCGTATCAAATAACACATTCGCTAGTTACGATAATTTCTATATAAAACCTAAAGCAATAGACGTTTCTGCCGTATCATCATGGAACAACAACGTTTTAACTAACAATATAATTTTCAACAATGGACATTATGACAGTTCACCATTTAATGGTTTTACTTCTCTAGGTTCCAACACATTACAAACAAACGGTTGTTACGGTTCCTGGTTAGAAAACCACGACGGAACATCATCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4ec781d475dee87d4a15a8bbf518738eff4e9eca9d62c6fe9525037dab7165cb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6699
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50