Protein

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Genbank accession

YP_013522085.1 [GenBank]

Protein name

tail fiber protein

RBP type

Evidence UniProt/TrEMBL

Probability 1,00

Evidence Phold

Probability 1,00

Evidence RBPdetect2

Probability 0,94

Protein sequence

MATLVTQDFEREIAEKTVNGGVIQYDEFIFAMIPNLTADNLAQHLTIPSESLIKHRQAVSKAGVINENAVVYSVTLGTEIGDFDFNWIGLINKRTNKLAAAVQADTIKKTRNKNNVQGNSLTRNVLLEFTGAKQLTGISVSADTWQIDFTVRLHGIDEKIRLTNRDLYGRAVFFDDAFLVKRGAGNNYTIDAGHAYIEGVRAEIKQAQTIQAASLPCSIYVDVVHHCTVTGAYETEIKFLKQSKSDYLDTARRQHYVQIIADIDSTGAVTDRRLLSPWFGITPKDLDDTTESARDKTGHTHKLPLASLIKKGLVKLYSGNDSDSEEMAATPKAVKTLKGFIDSLTRSLNNYIPNSKKSSAVNSNSEDTIGTSKAVKIAYDRAVEAEKKGLPVGAIVAFHKSAKPHGYLKAIGGTFNRATYPDLYVANGNSEIIPNLHRSDVGMTAYFAFDEIPDGWIAFDSIQSTVTQSSYPELYTHLVAKYGSIAQVPLAEDRFIRNAGRGLNVGKTQEDAIRNIKGQITIDDYSRETINGAFKFIGEGTAAGNRGGGTLIEFDASRVVPTADENRPKSIVLKLCIKAKNSFDDVIFWIKAFGEVVNSGSLDAGTIAQDLQQVRSKTQQLELLFNQNKAETALKIQDIEEKLNEERKVSKVIWSGNVTQNSTSVLELSESILNTTLVFYLQVSQGHSLQQNVDTHMMSAFVDEKLIHVSGRKYIHSAFYVGGWKSVQIEIVEDRKIKIIEASSMYLKQITKI

Physico‐chemical properties

protein length:	753 AA
molecular weight:	83184,11150 Da
isoelectric point:	7,00958
aromaticity:	0,07968
hydropathy:	-0,26680

Domains

Domains [InterPro]

IPR022225
ATT
3–157

IPR022225 DC_1854 IPR005068 IPR037053 SSF88874 DC_0818

IPR022225
ATT
3–150

IPR022225 IPR051934 IPR037053 DC_1811 Coil

IPR005068
STR
307–337

IPR005068 SSF88874

YP_013522085.1

1 753

Architecture

ATT

STR

ATT

STR

RBD

ATT 3-157 | STR 284-346 | STR 358-386 | ATT 389-440 | STR 441-610 | RBD 611-753

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR022225	ATT	DC_0271	3	157	InterPro cluster	Phage tail fibre protein, N-terminal domain	Central	Medium	Text match	271 proteins / 271 hits
IPR022225	ATT	DC_0271	3	150	InterPro cluster	Phage tail fibre protein, N-terminal domain	Central	Medium	Text match	271 proteins / 271 hits
DC_1854	STR	DC_1854	284	346	Novel HMM	DC_1854	Central	Low	Positional only	40 proteins / 40 hits
IPR051934	Unmapped	-	296	338	InterPro	Bacteriophage Tail Fiber Structural Protein	-	-	-	-
IPR005068	STR	DC_0738	307	337	InterPro cluster	Bacteriophage lambda, Tail fiber protein, repeat-2	Central	High	Text match	217 proteins / 347 hits
IPR005068	STR	DC_0738	358	386	InterPro cluster	Bacteriophage lambda, Tail fiber protein, repeat-2	Central	High	Text match	217 proteins / 347 hits
IPR037053	ATT	IPR037053	389	440	Merged direct domain	Phage tail collar domain superfamily	N-terminal	Low	Positional only	37 proteins / 37 hits
IPR037053	ATT	IPR037053	389	425	Merged direct domain	Phage tail collar domain superfamily	N-terminal	Low	Positional only	37 proteins / 37 hits
SSF88874	STR	SSF88874	390	436	Merged direct domain	SSF88874	Central	Low	Positional only	109 proteins / 109 hits
SSF88874	STR	SSF88874	441	579	Merged direct domain	SSF88874	Central	Low	Positional only	109 proteins / 109 hits
DC_1811	STR	DC_1811	457	610	Novel HMM	DC_1811	Central	Low	Positional only	19 proteins / 19 hits
DC_0818	RBD	DC_0818	580	753	Novel HMM	DC_0818	C-terminal	Low	Positional only	11 proteins / 11 hits
Coil	Unmapped	-	629	649	Coils	Coil	-	-	-	-

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Pasteurella phage vB_PmuM_CFP3 [NCBI]	3017169	Uroviricota > Caudoviricetes > Peduoviridae > Irtavirus CFP3 >
Host	Pasteurella multocida [NCBI]	747	cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pasteurellales

Coding sequence (CDS)

Genbank protein accession

YP_013522085.1 [NCBI]

Genbank nucleotide accession

NC_130755.1 [NCBI]

CDS location

range 17756 -> 20017
strand -

CDS

ATGGCGACTTTAGTCACACAAGATTTTGAGCGCGAGATCGCAGAAAAAACAGTAAACGGCGGCGTTATTCAATATGACGAATTTATTTTCGCGATGATTCCGAATCTAACTGCTGATAATTTAGCGCAGCATTTAACAATCCCGAGCGAAAGCCTTATTAAACATCGTCAAGCGGTGAGTAAAGCGGGCGTGATTAATGAAAATGCGGTGGTTTATTCAGTCACACTAGGCACAGAGATCGGCGATTTCGATTTTAACTGGATTGGATTAATTAATAAACGCACGAACAAGTTAGCGGCAGCAGTACAAGCGGACACAATTAAGAAGACACGCAACAAAAACAATGTACAAGGTAACAGTTTAACGCGTAACGTTTTATTAGAGTTTACCGGCGCTAAACAGCTTACGGGGATCAGCGTGAGCGCGGACACTTGGCAGATCGATTTTACAGTGCGTTTGCACGGCATTGATGAAAAAATCCGTTTAACAAACCGCGATCTTTACGGTCGTGCAGTGTTTTTCGATGACGCGTTTTTAGTAAAACGCGGAGCGGGCAATAACTACACAATCGACGCGGGTCACGCGTATATCGAGGGCGTGCGCGCAGAGATTAAACAAGCGCAGACAATTCAAGCGGCGTCGCTACCCTGCTCAATCTATGTTGACGTGGTCCATCATTGCACGGTCACGGGCGCATACGAAACAGAAATTAAATTTTTGAAACAATCGAAAAGCGACTATTTAGACACAGCGAGAAGACAGCATTATGTGCAAATTATCGCAGATATTGACAGCACGGGCGCAGTCACAGACCGTCGCTTGTTGTCGCCGTGGTTCGGTATTACGCCGAAAGACTTAGACGACACAACAGAAAGCGCACGCGACAAAACGGGACACACGCACAAATTGCCACTTGCAAGTCTGATCAAAAAAGGGCTTGTGAAATTGTATTCAGGCAACGACAGTGATAGCGAAGAAATGGCAGCAACGCCAAAGGCGGTGAAAACATTAAAAGGGTTTATTGATTCGCTTACTCGAAGTCTAAATAACTACATTCCGAATAGCAAAAAATCATCAGCAGTTAACAGCAACAGCGAGGACACAATCGGCACAAGTAAAGCAGTGAAAATTGCGTATGATCGGGCTGTTGAGGCAGAGAAAAAAGGCTTGCCGGTAGGGGCAATTGTTGCATTTCATAAAAGCGCCAAGCCACATGGTTATTTAAAAGCAATTGGCGGTACGTTTAATCGAGCAACTTATCCTGATTTATATGTCGCTAATGGGAATAGTGAGATTATTCCAAATTTACATCGTAGTGATGTCGGTATGACCGCTTATTTTGCGTTTGACGAAATTCCAGACGGATGGATTGCGTTTGATAGTATTCAATCGACAGTTACACAAAGCAGTTATCCGGAACTATATACACACCTTGTTGCTAAATACGGATCAATCGCACAAGTGCCACTTGCGGAAGATAGATTTATTCGGAATGCGGGAAGAGGGTTAAATGTTGGGAAAACGCAAGAAGACGCAATTAGAAACATAAAAGGACAAATTACTATTGATGATTATAGTCGAGAAACAATAAATGGAGCATTTAAATTCATCGGAGAGGGAACTGCGGCGGGGAATCGAGGCGGTGGTACTCTTATTGAGTTCGACGCGTCAAGAGTAGTTCCTACTGCTGACGAGAATCGCCCAAAATCTATTGTTCTGAAACTTTGCATTAAGGCTAAAAACTCTTTTGATGATGTTATCTTCTGGATAAAGGCTTTTGGCGAAGTTGTAAATTCTGGTTCTTTAGATGCCGGAACAATCGCGCAAGACTTACAACAAGTTAGAAGTAAAACGCAGCAACTTGAATTGTTATTTAATCAGAATAAAGCAGAAACGGCGTTAAAAATTCAAGATATTGAAGAAAAACTTAATGAAGAAAGAAAAGTAAGTAAAGTGATTTGGTCAGGAAATGTGACTCAAAATTCAACAAGCGTGCTTGAGTTGTCAGAATCTATTCTAAATACGACGCTTGTTTTCTATTTGCAAGTATCGCAAGGACATTCGTTACAACAGAATGTCGATACACATATGATGTCTGCTTTTGTAGATGAAAAACTTATTCACGTTTCGGGTAGAAAATACATTCATTCTGCTTTTTATGTCGGGGGATGGAAAAGCGTTCAAATTGAAATTGTTGAAGATAGAAAAATAAAAATAATCGAAGCTTCAAGCATGTATCTAAAACAAATAACAAAAATCTAA

Genome Context

Tertiary structure

PDB ID

e15283bf4a62703e5167d022c99a6ff0571596bdc0261e4451da14bcdaa81690

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,7846

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Literature

Title	Authors	Date	PMID	Source
Complete genomic sequence of Pasteurella multocida phage vB_PmuM_CFP3	Cheng,L., Chen,H., Jiang,N., Fu,Q., Liu,R., Huang,Y. and Fu,G.	2024-11-13	—	GenBank

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence

Literature