Protein

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Genbank accession
YP_009018638.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MAIYDAGTASLDADGTVTGVGTTWRQPLTLIRVGATMIFNTSPISIVTIAEILSDTSIRAFNDKGFIAPEGTQYFILAHDGITVQGLAQDVAETLRYYQSSETQIADLVELAKSGDFDFDKLQRLVNEAKASETNAASSALAASASQQAAATSQTLAESSASSAQAAYNNTVDVIANAGDAGTLVTLANIGIATDSTPLINNFDWQNFTFKSGGLYRANVSSMMNTPGDITLTFGESIAALCIQVISKSSNTTTHSLRVVSQSSTSNQYSREIYIQFTGAPGARVFAPGREMVMVGAGKSGGGATASRARNLLDVYSKAESDAIRTIALGGNFQDGMTIQSKSQQILNVKNGIAEAYVWAGSLPKVVPANSTPETSGGIGDGAWVQLGGYSSGVSSIYDLINKQAQPQSIVNVKSYISGSNSGGGVFYWSETTPKSRHNGVTVFSPTVPFDGTHSGIADFISASGESDPSGLGCWVRITSGFDEIHTEWAGHDVSGINTSNASVMKCIQMGHEQSKTVRLSAGRLKVSFDNGVQYNDKYSVFRQTAFFLSGLKVKIFAKNDVEIDISASSSPERVVFGLKGCDFIAEGFNWNSDFSDYSIGESDTTHRAREDWFGFLAEGCSSVVVDKMIVNASRAFINADALNGDSNAFIALRNSKFKYNVNYCLITRNCDYSEFIGNETKQSGRVWHTYGEDYAISERSRRSYAHNNKFYYPISIQSRITPAGENITVTDNYYAGSGIFVEAFACNNVICKGNTSIITTDSVGRASSHYLLITNDDSNDWGVNEGLSNIIISNNIMIGGGISVQGYNEGVQVKNGLIITDNTMTDTKAPVLGASSWVGTTFSGNKCRFTPGYGGLGVGGQYPTVSNNIIDGGYISCRFGYEITSPTFENNIFRNTTGATLSTIFDIDSFSGGIFRNNNFRASSFLMVFPINDNVVKVGFRYVDYGFSSRPTDTYGSKCVIRAGDWIINDNPSTYGSAAAWIGGSNGAYLQLSTAV
Physico‐chemical
properties
protein length:997 AA
molecular weight: 106673,09160 Da
isoelectric point:5,17050
aromaticity:0,10130
hydropathy:-0,13671

Domains

Domains [InterPro]
DC_1200
STR
1–567
DC_1200 IPR011050
IPR040775
RBD
323–388
IPR040775 DC_0317
G3DSA:2.10.10.80
ATT
326–386
G3DSA:2.10.10.80
YP_009018638.1
1 997
Architecture
STR
ATT
STR
STR 1-325 | ATT 326-386 | STR 387-997
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009018638.1
1 997
Domain Start End Length (AA) Confidence
N-terminal 1 499 499 0,9762
Central domain 500 945 447 0,9880
C-terminal 946 997 51 0,9705
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-499
Central
500-945
C-terminal
946-997

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage phiEB49
[NCBI] 		1048207 Uroviricota > Caudoviricetes > Drexlerviridae > Lindendrivevirus > Lindendrivevirus EB49
Host Escherichia coli CFT073
[NCBI] 		199310 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009018638.1 [NCBI]
Genbank nucleotide accession
NC_023743.1 [NCBI]
CDS location
range 12476 -> 15469
strand +
CDS
ATGGCGATTTATGACGCGGGCACTGCCTCGCTAGATGCTGATGGTACAGTTACTGGCGTAGGGACAACCTGGCGACAACCACTAACGCTCATTCGCGTTGGTGCAACAATGATTTTCAATACATCACCGATTAGCATCGTGACAATCGCTGAGATCTTGAGTGATACAAGCATTCGCGCGTTTAACGATAAGGGATTTATAGCTCCGGAAGGCACTCAGTATTTCATCCTGGCTCATGACGGGATTACAGTTCAAGGGCTGGCTCAAGACGTCGCTGAGACTCTTCGTTACTATCAGTCAAGTGAGACGCAGATTGCGGATCTTGTTGAGCTTGCTAAGTCTGGTGATTTTGATTTTGATAAGTTACAGCGATTAGTTAATGAAGCAAAGGCAAGCGAAACAAATGCAGCATCAAGCGCATTGGCAGCATCAGCCAGCCAGCAAGCTGCCGCTACAAGCCAGACTCTGGCTGAATCAAGCGCAAGCAGTGCGCAAGCGGCATACAATAACACGGTTGATGTTATTGCTAATGCTGGTGATGCTGGAACCTTGGTTACGCTTGCTAATATTGGTATAGCTACAGATTCAACACCGCTAATAAATAACTTCGATTGGCAGAATTTTACCTTTAAGTCAGGAGGACTTTATCGCGCCAATGTTTCATCAATGATGAACACCCCGGGCGATATCACTTTAACCTTCGGTGAATCCATAGCTGCCTTATGTATTCAAGTTATATCAAAGTCAAGTAATACAACAACGCACTCCTTAAGGGTTGTATCTCAGTCATCAACAAGCAACCAGTATAGCAGGGAAATTTACATCCAGTTTACAGGAGCGCCTGGCGCAAGGGTTTTTGCACCAGGTAGAGAAATGGTGATGGTTGGGGCTGGCAAGTCCGGAGGTGGAGCTACGGCATCGAGGGCTAGAAACTTACTTGATGTTTACTCAAAAGCCGAATCTGACGCAATAAGGACAATTGCTCTTGGTGGGAACTTTCAGGATGGAATGACTATCCAGTCGAAAAGCCAGCAAATCTTAAATGTTAAAAATGGAATTGCGGAGGCTTATGTGTGGGCGGGGTCACTCCCTAAAGTTGTTCCAGCAAACTCAACGCCTGAAACATCTGGCGGGATTGGTGATGGAGCTTGGGTTCAGCTTGGCGGATACTCTTCTGGTGTTAGCTCTATTTATGACTTAATTAACAAACAAGCACAACCTCAGTCAATTGTGAATGTTAAGTCTTATATTTCTGGCTCCAATTCTGGTGGTGGTGTTTTCTATTGGAGCGAAACAACTCCAAAAAGTAGACACAATGGGGTTACAGTGTTCAGCCCCACCGTTCCATTTGACGGAACGCATAGCGGAATTGCTGATTTCATTTCCGCTTCTGGCGAATCTGATCCGTCAGGTCTTGGGTGTTGGGTTCGAATCACCTCTGGATTTGATGAAATTCACACCGAATGGGCTGGGCATGATGTTTCTGGCATCAACACATCAAATGCATCAGTAATGAAGTGCATTCAGATGGGTCACGAACAGTCAAAGACTGTGAGACTCAGTGCAGGAAGGCTAAAAGTCTCTTTCGACAATGGGGTTCAGTACAACGACAAATATAGTGTTTTTAGGCAGACTGCCTTTTTCTTGAGCGGCTTAAAGGTAAAGATTTTTGCCAAAAACGATGTAGAGATTGATATATCAGCGAGCTCTTCTCCGGAAAGGGTTGTTTTTGGACTTAAGGGTTGTGATTTCATCGCTGAAGGCTTTAACTGGAATAGTGATTTTTCAGACTATTCAATCGGTGAATCAGACACAACTCACAGGGCTAGGGAAGACTGGTTTGGATTCCTTGCTGAAGGTTGCTCATCAGTTGTTGTTGATAAGATGATTGTTAACGCCTCAAGGGCATTCATAAACGCTGATGCTTTAAATGGAGACTCAAACGCATTCATTGCCCTAAGGAACTCAAAGTTTAAATATAACGTAAACTACTGCCTGATAACCAGGAATTGTGACTATTCTGAATTTATTGGAAATGAAACAAAGCAGTCTGGTAGGGTGTGGCATACTTATGGTGAGGACTATGCGATTTCAGAGCGCAGCAGAAGGTCTTATGCTCACAACAATAAGTTCTATTATCCTATATCCATCCAGTCAAGGATAACCCCAGCTGGAGAGAACATAACAGTTACTGATAACTATTATGCTGGCTCAGGGATTTTTGTTGAAGCCTTCGCTTGTAACAATGTGATATGTAAGGGAAATACAAGCATTATTACAACCGACTCTGTTGGCAGAGCGTCGTCTCACTATCTTTTGATAACTAACGACGATTCCAATGATTGGGGTGTTAATGAAGGATTGAGTAACATCATTATATCTAACAACATAATGATTGGAGGGGGAATATCTGTGCAGGGTTACAACGAAGGGGTGCAGGTTAAAAATGGATTGATTATCACAGATAATACAATGACTGATACAAAAGCGCCTGTGCTTGGTGCTTCGTCGTGGGTTGGAACTACATTCTCTGGTAACAAATGCAGGTTTACACCTGGATATGGTGGCCTTGGGGTTGGAGGGCAGTACCCTACAGTCAGCAATAACATTATAGACGGTGGGTATATTTCGTGCAGGTTTGGGTATGAAATAACATCACCAACGTTTGAAAACAACATTTTTAGAAACACAACTGGAGCGACACTATCAACCATTTTTGATATTGATAGTTTTTCTGGTGGTATTTTTAGAAACAACAACTTCAGGGCCTCTAGCTTCCTTATGGTGTTCCCAATTAACGATAACGTTGTTAAGGTTGGTTTTAGATATGTTGACTATGGTTTCAGTTCAAGGCCAACAGATACGTATGGTTCAAAGTGCGTAATTAGAGCTGGTGACTGGATTATTAACGACAACCCATCAACTTATGGCTCTGCTGCTGCCTGGATTGGTGGATCAAACGGTGCTTATCTTCAACTAAGTACTGCTGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
760b8e8a71ef6e3b3fb4cb20931ff1b2633b636117d079746c1dcf31c87a2a79
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6684
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50