Protein

View in Explore
Genbank accession
QBQ80947.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,55
Protein sequence
MPPAIIGAVVAIGAAAGAAAGIITATTALVIGIAASAAGALLTKTQSYNFDSYTPQSERKQVIRAAAASRTVIYGTTVSSGVLVFAEEEPGVQDPDKHGENYEKLTLVLALAGHELTEVGQVWLGDDPIGTYAGNASYKVYNNPTTVSQDMLNRCPSWKRDMIGKGICWMQLNLVYDSQKFPAGLPNVKCVKKGRKVLDPRTGQMVFSNNAALVILDYLRVYLKRGDDSILWDQFKEAANICDERVKNADDTFESRYTINGEFDMDEAPSKILEDMLDACGGELTYIGGKHGILVGAYYGPPELTLDTSCIAGDIKITPETAFKDRTNTITGTYIDPLQNYQEADFPSVSVSEWVQQDGQEITQDVDYRFVTSPYQAQRLANLTLKRKRIGRSIEIPCNMRGYRFRPGMYVYVDIPNIGMNKVEMRVIKWQFDPKGGVTVTVRQDFPDLWDDAIGKPVERPDLVDLPTGGAMQPQNLQYEVLQISDVVQGVLSWQNIMAVAYNNVVIKKDGTTVLTVQVPGQSTRITGLIRGAYTAHVKAVAYTGATSPEAYLEFNIQAPSAPTSVEVTQGYFAVTLKPKSADLANVSTQYDFWTSGETRLPSAAVDVVERQATRAGMGTTWTSEGLLNDHTYYWYVRAINAFGSSSFVEVAARCFTDAAGLIPQIDTEFKGTNTYKELMAEIGSVSDGVKSYVDDQIETSEGRLTQTIDTVQQSVVLVDGKVQQQGVTINEQGQLIDAQGKLIETNGQQINVVKATVQEVSKSVVDLEGNVNAQWGAKIQVDSKGQKYVAGIQLGMEGSGGAIQSYFMVNANNFAIYNPTNSTADLAFAVKNGQVFMKAAFIENGSIDNAKIGNYIQSNNYVAGSAGWKLNKAGDAELNNVVVRGTVYATNGRFTGEIQATSGTFKGTVEASRFIGDVVAIYTFPDILSIGTDISGEQYKVYTYNDSSSSPQARSVVFDCIVRTTNTTNGYKLKLTLAGQYREYVFYQTNTMIPIKFGVSGVTTRSIQLILDTDRGSGTHIDIIAPTLTIGRASGTFTVSG
Physico‐chemical
properties
protein length:1042 AA
molecular weight: 113244,28470 Da
isoelectric point:5,06813
aromaticity:0,08925
hydropathy:-0,17217

Domains

Domains [InterPro]
DC_0754
STR
1–1001
DC_0754
IPR032876
ATT
315–419
IPR032876 IPR013783 IPR053171
IPR057587
ATT
562–666
IPR057587 IPR015406
QBQ80947.1
1 1042
Architecture
STR
ATT
STR
ATT
STR
STR 1-314 | ATT 315-419 | STR 420-561 | ATT 562-666 | STR 667-1001 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBQ80947.1
1 1042
Domain Start End Length (AA) Confidence
N-terminal 1 21 21 0,9316
Central domain 22 220 200 0,0968
C-terminal 221 1042 821 0,2126
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-21
Central
22-220
C-terminal
221-1042

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoS_HdK1
[NCBI] 		2508190 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBQ80947.1 [NCBI]
Genbank nucleotide accession
MK373794.1 [NCBI]
CDS location
range 24349 -> 27477
strand +
CDS
ATGCCACCAGCAATAATTGGAGCTGTAGTTGCTATCGGGGCAGCGGCTGGCGCAGCGGCAGGTATTATCACAGCCACTACCGCGCTTGTGATTGGTATTGCTGCCAGTGCTGCTGGAGCTCTACTTACAAAAACTCAGAGCTATAACTTTGACTCCTATACACCTCAGAGCGAGCGTAAACAGGTTATTCGTGCCGCCGCTGCATCTAGAACTGTGATTTATGGGACAACTGTGTCTAGTGGTGTTCTTGTATTTGCAGAAGAAGAACCAGGAGTACAAGATCCAGATAAACACGGTGAGAACTACGAGAAGTTGACTCTTGTATTGGCGTTAGCCGGACACGAACTGACAGAAGTAGGACAAGTGTGGTTAGGGGACGATCCAATAGGTACTTATGCTGGAAACGCATCCTATAAGGTATACAACAACCCTACTACGGTCAGTCAAGACATGTTAAATCGTTGCCCATCATGGAAAAGGGACATGATTGGTAAAGGTATCTGCTGGATGCAATTGAATCTAGTATATGATTCACAGAAGTTTCCAGCTGGGCTTCCTAATGTCAAATGTGTTAAGAAGGGGAGAAAAGTTCTAGACCCTAGAACTGGTCAGATGGTGTTTAGCAATAATGCCGCCCTTGTGATTTTGGACTATCTTCGAGTGTATCTTAAACGCGGAGACGATTCAATTCTTTGGGACCAGTTCAAAGAGGCCGCTAACATATGTGATGAAAGAGTTAAGAACGCGGATGACACGTTTGAATCCCGGTATACTATCAACGGGGAATTTGACATGGATGAAGCACCTTCCAAGATCCTGGAAGACATGCTTGACGCTTGCGGTGGGGAGTTGACTTATATCGGCGGTAAGCATGGTATCCTAGTAGGTGCATATTACGGGCCTCCTGAATTAACTCTGGATACGAGTTGCATTGCTGGTGACATTAAAATCACACCAGAGACAGCTTTTAAAGATCGAACTAATACAATCACAGGTACTTACATCGATCCTCTGCAAAACTATCAAGAAGCAGACTTCCCGTCTGTAAGTGTTTCTGAATGGGTACAACAAGACGGTCAAGAGATTACACAAGACGTCGATTATCGTTTTGTCACAAGCCCATATCAGGCTCAACGTCTAGCTAACTTGACGTTGAAACGCAAACGTATTGGTCGTTCCATCGAGATACCATGTAACATGCGTGGGTATCGTTTCCGTCCAGGTATGTATGTCTACGTTGACATTCCTAATATTGGAATGAACAAAGTAGAGATGCGTGTTATTAAGTGGCAGTTTGATCCGAAAGGTGGTGTCACTGTAACTGTACGTCAAGACTTCCCGGACTTATGGGACGATGCAATTGGCAAACCTGTAGAGCGACCAGATCTAGTGGATTTGCCTACTGGTGGCGCTATGCAACCTCAGAACCTACAATATGAAGTCTTACAAATTAGCGACGTTGTACAGGGTGTTCTGTCGTGGCAAAATATAATGGCTGTAGCCTACAACAACGTAGTAATTAAGAAAGATGGTACTACCGTATTGACGGTGCAAGTACCGGGCCAGAGCACGCGGATTACGGGGCTTATTCGCGGCGCTTATACAGCACATGTGAAAGCTGTGGCGTATACCGGCGCAACAAGTCCAGAAGCGTATCTTGAATTCAATATTCAAGCACCTTCCGCTCCTACGTCTGTTGAAGTGACGCAAGGCTACTTCGCAGTAACATTGAAACCAAAATCTGCAGATCTAGCTAACGTTAGTACACAATATGATTTCTGGACGTCCGGTGAAACAAGATTACCATCCGCCGCTGTAGACGTTGTAGAACGACAGGCCACCCGTGCTGGTATGGGCACAACGTGGACTTCAGAGGGGTTGCTTAATGACCACACTTATTACTGGTACGTGCGGGCAATTAATGCTTTTGGTTCTTCTTCATTTGTAGAGGTGGCTGCAAGATGCTTCACAGATGCTGCTGGCCTTATTCCGCAAATTGACACAGAGTTCAAAGGTACTAACACCTATAAAGAACTTATGGCTGAGATTGGAAGCGTCAGCGATGGTGTCAAGAGTTATGTGGACGACCAAATTGAAACCTCTGAAGGGCGCTTAACTCAAACAATAGATACAGTGCAACAATCTGTAGTTCTTGTTGACGGTAAAGTGCAGCAACAAGGCGTCACAATCAATGAACAGGGGCAGTTAATAGATGCTCAAGGTAAGTTAATTGAGACAAACGGCCAACAGATTAATGTGGTCAAAGCTACCGTACAGGAAGTCAGTAAGTCCGTTGTGGATCTTGAAGGTAACGTCAACGCTCAGTGGGGTGCCAAGATCCAGGTGGATAGTAAAGGTCAAAAATACGTTGCCGGTATTCAGTTAGGTATGGAAGGTTCCGGTGGAGCTATCCAATCTTACTTTATGGTCAACGCCAACAACTTTGCTATCTATAACCCAACTAACAGCACAGCGGATTTAGCATTTGCAGTTAAAAACGGTCAAGTGTTCATGAAGGCAGCGTTCATTGAGAACGGTTCTATTGATAATGCTAAGATCGGTAACTATATTCAATCTAACAACTATGTAGCTGGTTCTGCAGGCTGGAAGTTGAATAAAGCTGGGGATGCTGAACTGAATAATGTTGTCGTGAGGGGTACGGTATATGCCACAAACGGTAGATTCACAGGCGAGATACAAGCAACTAGTGGGACATTTAAAGGTACAGTTGAAGCAAGTAGATTTATCGGGGATGTAGTCGCAATCTATACTTTCCCAGATATATTAAGTATAGGTACGGATATTTCCGGTGAGCAATATAAAGTATACACTTATAATGACTCGTCATCCTCCCCACAAGCAAGATCTGTTGTATTTGATTGTATAGTGAGAACTACAAATACTACAAATGGATATAAATTAAAACTAACATTAGCAGGTCAATATAGGGAATATGTATTCTATCAAACTAATACTATGATTCCTATAAAATTCGGAGTAAGTGGAGTTACAACACGTAGTATACAACTGATTCTGGATACAGATAGGGGTAGTGGTACACATATAGATATAATAGCACCGACATTAACAATAGGGAGAGCTAGTGGTACTTTCACTGTAAGTGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
34249f3da54ee7d5e61f257b54f9f229c96a2005a3a41fe9b213457899b5dcc6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7382
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Still something new to discover - new insights into E. coli phage diversity and taxonomy Korf,I.H.E., Adriaennsens,E., Dreiseikelmann,B., Kropinski,A., Nimtz,M., Meier-Kolthoff,J.P., Rohde,M., van Raaij,M. and Wittmann,J. 2019-05-17 — GenBank