Protein

View in Explore
Genbank accession
QXM18681.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MIYGSSAPAADKRLAQNLWIDTTGNANTPKRWNGSTWVAVTDKVATDAAAAAANALSVAQSKADASVVQNLSTKVSDNEGKLTTQGQSITGLQNSLSTTNGNVTTAQQAAQAAATAAGAKGEVIYGSAAPATDKRLAQNLWIDTTGNANTPKRWNGSTWLAVTDKVATDAATAAASALSQVATKAEASAVNSLTNRVSNAEGTLSSNSSDITQLKNSIGTAQPFVAGKSWEFIGSTLGWVGTISGSTFTAGPLFATAGKCPNLQCNFTPAIAGAENPYLRIRLRRRNTTRSGAQMYWANEDGGLAEARRMAWTISLTTNDWQDIEFDLSGHAGWNGKNIIAIRLDMMSSVDASGEIDIAYIAVGRRSAAASAQAVASLESNVTQQGDKLTAEGKRIDGLYTAVGDANAAIQNEAKARADGDGALSQQIQTTQSSLGATNASVQQISTAQTGLNNRVNAQYSVKVAVTQNGVYALGGIGIGIQNQSGVLQSVVAVLADQFAVINAAGNGYVSPFAIQGGQVFMNDAFIRDGSIINAKIQDAAISNAKIANGAITSAKIGVAEIDTLRIRGNAVTVPVSASSPGNVLGAGVGQWQNLIAVGVQMDEAGFITAQYSCYQGFGSGIRKYQFQMDINGLVIAQGGGDWADGFPNLMGSIGVAPGYFVITVKWWGENSGVGVQNHNLFAMGTKR
Physico‐chemical
properties
protein length:688 AA
molecular weight: 71228,48160 Da
isoelectric point:7,60139
aromaticity:0,06541
hydropathy:-0,09259

Domains

Domains [InterPro]
G3DSA:1.20.5.340
STR
57–127
G3DSA:1.20.5.340 G3DSA:1.20.5.340 DC_1604
DC_0308
STR
68–396
DC_0308 IPR015406
IPR053171
Unmapped
371–587
IPR053171
QXM18681.1
1 688
Architecture
STR
RBD
STR 57-396 | RBD 397-675 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PARCL1pr
[NCBI] 		2856175 No lineage information
Host Pseudomonas sp.
[NCBI] 		306 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QXM18681.1 [NCBI]
Genbank nucleotide accession
MZ496292.1 [NCBI]
CDS location
range 60 -> 2126
strand +
CDS
GTGATCTACGGTTCGTCCGCACCTGCAGCGGACAAGCGCTTGGCGCAAAACCTGTGGATCGATACCACTGGCAATGCCAACACGCCGAAGCGCTGGAACGGCAGCACCTGGGTCGCTGTCACCGACAAGGTGGCCACCGATGCCGCTGCAGCTGCTGCCAATGCCCTGTCGGTCGCCCAAAGCAAAGCTGATGCTTCGGTGGTACAGAACCTGAGCACCAAGGTCAGCGATAACGAGGGCAAGCTGACCACGCAAGGCCAGTCGATCACGGGGCTGCAGAACAGCCTGAGCACCACCAATGGCAACGTTACGACGGCGCAGCAAGCGGCTCAGGCGGCGGCGACGGCGGCCGGCGCCAAGGGGGAGGTGATCTACGGTTCGGCCGCACCGGCCACTGACAAGCGCCTGGCGCAAAACTTGTGGATCGATACCACCGGCAATGCCAACACGCCCAAGCGCTGGAACGGCAGCACCTGGCTGGCCGTCACCGACAAGGTGGCCACGGATGCGGCCACGGCCGCCGCCAGTGCGCTGAGCCAGGTGGCGACCAAGGCCGAGGCGTCGGCCGTGAACTCGCTGACCAACCGTGTCAGTAACGCCGAAGGTACGCTCAGCAGCAACAGCAGCGATATCACCCAGCTGAAAAACAGCATCGGCACGGCGCAGCCCTTCGTGGCGGGCAAGTCCTGGGAGTTCATCGGTTCAACCCTTGGATGGGTTGGCACCATCAGCGGTTCGACGTTCACCGCCGGCCCGCTGTTCGCCACGGCGGGCAAATGCCCGAACCTGCAGTGCAACTTCACCCCGGCGATTGCCGGCGCCGAGAACCCTTACCTGCGTATCCGGCTGCGTCGACGCAACACCACTCGTTCGGGCGCCCAGATGTATTGGGCGAACGAGGACGGCGGCCTGGCCGAGGCCCGCCGGATGGCGTGGACCATCAGCCTGACCACCAACGATTGGCAAGACATTGAGTTTGACCTGTCTGGCCACGCCGGCTGGAACGGGAAAAACATCATCGCCATTCGCCTGGACATGATGAGCTCGGTGGACGCGTCCGGCGAAATTGACATCGCCTACATCGCGGTGGGACGCCGCTCGGCGGCCGCTTCGGCGCAGGCGGTGGCCAGCCTGGAGAGCAACGTTACCCAGCAGGGTGACAAGCTCACCGCCGAGGGGAAGCGAATCGACGGGTTGTACACCGCCGTAGGCGATGCGAACGCGGCGATTCAGAACGAAGCCAAAGCCCGGGCTGATGGGGATGGGGCGTTAAGCCAGCAGATTCAAACCACGCAGTCGTCTTTGGGCGCTACCAATGCTTCGGTGCAGCAGATCAGTACGGCGCAAACCGGATTGAATAATCGGGTCAACGCTCAGTACTCGGTCAAGGTGGCAGTTACCCAAAACGGAGTGTATGCCCTTGGCGGGATTGGGATCGGCATCCAGAACCAGAGTGGTGTGCTGCAGTCGGTAGTGGCCGTTCTGGCGGACCAATTCGCGGTAATCAACGCCGCTGGCAATGGTTACGTCAGTCCGTTCGCGATTCAAGGCGGCCAGGTGTTCATGAATGATGCCTTCATCCGCGATGGCAGCATCATCAACGCCAAGATCCAAGATGCCGCTATCAGCAACGCCAAGATCGCCAACGGCGCTATTACGTCGGCAAAAATCGGGGTGGCCGAAATTGACACGCTGCGCATCCGTGGCAACGCCGTCACGGTTCCGGTTTCTGCTAGCAGCCCCGGGAATGTGCTCGGAGCCGGTGTAGGTCAGTGGCAAAACCTGATCGCTGTCGGCGTGCAAATGGATGAAGCAGGGTTCATCACTGCGCAATACAGCTGCTACCAAGGGTTTGGCAGTGGTATCCGTAAGTACCAATTCCAGATGGATATCAACGGCCTGGTTATCGCTCAAGGTGGCGGCGACTGGGCGGATGGTTTTCCTAACCTGATGGGATCGATCGGCGTGGCCCCGGGTTACTTCGTCATCACTGTGAAGTGGTGGGGAGAGAACTCGGGGGTTGGCGTTCAGAACCACAACCTCTTTGCAATGGGGACGAAGCGATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
c5279a374d4d99f45b841c657c74ba18b67994308dceb28164cc3c7799201f61
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7437
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Assessing the genomic composition, putative ecological relevance and biotechnological potential of plasmids from sponge bacterial symbionts Oliveira,V., Polonia,A.R.M., Cleary,D.F.R., Huang,Y.M., de Voogd,N.J., Keller-Costa,T., Costa,R. and Gomes,N.C.M. 2022 36108440 GenBank