Protein

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Genbank accession
QGZ18099.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MQIPFGEWLPDQPEYLNPGANTANNVYFARQSYKRFPSLVAYSSNNIGANSRGAGSFRDNSNNVFNFVAKNTDIYQLDGGTFTSRKGSLTGSNTDYFTFTQFGQYVVASNGVDAPQYYLMGTSTNFANLSSIATSGSVPVFKVSGVVRDFFVTGNHTNNSNRIQWSGINDLTTWAAGTKQSDLQDLPGSGGQIVHITSGEIGYVFRQNQIIRMDYVGGATVFRLSVISPNRGAVLGRTVCQDNRRVFFYADDGFFEINGDQVISIGAEKVNRFFDTDLNKAFSDRICAAVDPFNQLALWLYPSASNTANTTGICDKVIIYNYATQKWSTADASASTIFSQFVGAYTVELMDIISENLDAINIALDTDFWNGGQLYLGAIDSDFKAAIFSGTENEGTLETRELELFPGHRSSITNIRPIVDATSTVTISSRERLADTATESSSSSMVASGDNPVRQSGRYFKIKVKTPSGSVWTHAQGVDLIASRIGLR
Physico‐chemical
properties
protein length:488 AA
molecular weight: 53275,40090 Da
isoelectric point:5,26422
aromaticity:0,11475
hydropathy:-0,21803

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QGZ18099.1
1 488
Domain Start End Length (AA) Confidence
N-terminal 1 353 353 0,4941
Central domain 354 477 125 0,1335
C-terminal 478 488 10 0,9969
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-353
Central
354-477
C-terminal
478-488

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC106P
[NCBI] 		2686460 No lineage information
Host Candidatus Pelagibacter sp. HTCC7211
[NCBI] 		439493 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QGZ18099.1 [NCBI]
Genbank nucleotide accession
MN698244 [NCBI]
CDS location
range 25891 -> 27357
strand -
CDS
ATGCAAATACCTTTTGGAGAATGGCTACCAGATCAACCTGAGTATTTAAATCCAGGTGCGAACACTGCTAACAATGTTTACTTTGCAAGACAATCTTACAAACGATTTCCTTCTTTAGTTGCTTATTCATCAAACAATATCGGTGCAAATAGTAGAGGTGCAGGTTCATTTAGAGATAACTCAAATAATGTATTTAACTTTGTTGCAAAAAATACTGACATCTATCAATTAGATGGTGGAACATTTACATCAAGAAAAGGAAGTTTAACTGGTAGTAACACAGATTATTTTACCTTTACACAATTTGGTCAATATGTTGTTGCAAGTAATGGTGTAGATGCACCACAATATTATTTAATGGGAACATCAACTAACTTTGCAAACTTATCTAGTATTGCTACATCTGGAAGTGTTCCTGTATTTAAAGTTTCAGGTGTAGTTAGAGATTTTTTTGTAACTGGTAATCACACAAATAATTCAAACAGAATTCAATGGTCAGGTATTAATGACTTAACAACTTGGGCAGCAGGAACTAAACAATCTGATTTACAAGACTTACCTGGTTCAGGTGGACAGATAGTTCACATAACATCTGGAGAAATTGGTTATGTGTTTAGACAAAATCAAATTATTCGTATGGACTATGTGGGTGGTGCTACAGTATTTAGATTATCAGTAATCTCACCTAATAGAGGTGCAGTATTAGGAAGAACTGTTTGCCAAGATAATCGTAGAGTATTTTTCTATGCAGATGATGGTTTTTTTGAAATTAATGGAGATCAAGTTATTTCTATAGGTGCTGAGAAAGTTAATAGATTTTTTGATACAGATTTAAACAAAGCATTTAGTGATAGAATATGTGCAGCAGTTGATCCATTTAATCAACTAGCTTTATGGTTATATCCATCTGCTAGTAACACTGCAAACACAACTGGTATATGCGATAAAGTTATTATCTATAATTATGCTACACAAAAATGGTCAACAGCAGATGCTAGTGCTAGTACAATCTTTTCTCAATTCGTTGGTGCATATACTGTTGAATTGATGGATATTATTTCAGAAAACTTAGATGCTATCAATATTGCTTTAGATACTGACTTTTGGAATGGTGGTCAGTTATATCTAGGTGCAATAGATAGTGATTTTAAAGCTGCTATTTTCTCAGGTACTGAAAATGAAGGAACTTTAGAAACTAGAGAATTAGAGTTGTTTCCAGGACATAGAAGTAGTATAACCAATATCAGACCGATTGTTGATGCTACATCTACAGTTACTATTAGTAGTAGGGAAAGATTGGCAGATACAGCAACAGAATCTTCATCATCATCTATGGTGGCTAGTGGGGATAATCCAGTTAGACAATCAGGTAGATATTTTAAAATTAAAGTAAAAACACCTTCAGGATCTGTTTGGACTCATGCTCAAGGTGTTGATTTAATTGCATCAAGAATAGGTTTGAGATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
910e9990553b110a719c73de63a12fc007c6798d35af25b0a3b43d7717a1a087
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9160
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel pelagiphages prevail in the ocean Zhang,Z., Qin,F., Chen,F., Chu,X., Luo,H., Zhang,R., Du,S., Tian,Z. and Zhao,Y. 2019 — GenBank