Protein

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Genbank accession
AFJ21456.1 [GenBank]
Protein name
gp1
RBP type
TF
Evidence RBPdetect
Probability 0,84
Protein sequence
MVAPSNPLRADSLFDSEDGSLLTKKNGIHTLYTWSESQGWTNVTDLTTHISRFKAAMIFLFDDEADNFDDGFRIVKYMDPSYPDSSSIGLNSGTTTSSWMLSQPWHYHSFYDTKAVQVNGQPFASAMADFVQFWNGREWERWPMGDSTSFILADSDNPYFVRGHTPFFAEAHTQGTLELDYPAAGRIGGQTPDDSTTARPQRKSGGETAVQLRLFRVLDDGLQVIDNNNFLYFRAGADGNTFDRHDLSKLAPQIVGYAALAIQGTKFGEPRMQSVKSYGRFPTLPISTDVRFDIRNLKGTFVVDALGVNVPSSWEVRLIDTHKTTTTTDDDTTKIDPPSEGYRFTISTKRIPTPGPAPMIVAQDSADAGVQPRFKLLID
Physico‐chemical
properties
protein length:379 AA
molecular weight: 42185,43170 Da
isoelectric point:5,11911
aromaticity:0,11346
hydropathy:-0,43879

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salisaeta icosahedral phage 1
[NCBI] 		1183239 No lineage information
Host Salisaeta sp. SP9-1
[NCBI] 		1089709 Bacteria > Bacteroidetes > Bacteroidetes Order II. Incertae sedis > Rhodothermaceae > Salisaeta >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFJ21456.1 [NCBI]
Genbank nucleotide accession
JN880423 [NCBI]
CDS location
range 53 -> 1192
strand +
CDS
ATGGTCGCTCCAAGCAATCCGCTCCGCGCCGACAGCCTGTTCGACTCGGAAGATGGGTCGCTGCTCACCAAGAAGAATGGCATCCACACGCTGTACACGTGGAGTGAGTCACAGGGCTGGACGAACGTCACAGACTTGACGACGCACATTTCGCGTTTCAAGGCGGCGATGATCTTCCTCTTCGACGATGAGGCCGACAACTTCGACGATGGATTCCGAATCGTGAAGTACATGGACCCATCATACCCTGATTCCTCGTCGATCGGGCTGAATTCAGGCACCACAACATCTTCGTGGATGCTCTCGCAGCCGTGGCACTACCATTCATTCTACGACACGAAAGCTGTTCAGGTCAATGGGCAGCCTTTCGCGTCTGCAATGGCCGATTTTGTGCAGTTCTGGAATGGTAGGGAGTGGGAACGGTGGCCGATGGGCGATAGCACATCGTTCATCTTAGCGGACAGTGACAACCCGTATTTTGTCCGCGGGCACACGCCTTTTTTTGCTGAAGCGCACACGCAGGGCACGCTGGAGCTCGATTATCCCGCGGCAGGGCGCATTGGTGGACAGACCCCCGATGATTCGACAACTGCCCGGCCACAACGCAAGTCAGGCGGCGAAACAGCAGTGCAACTGCGTCTTTTTCGCGTGCTCGATGATGGGTTGCAGGTCATAGACAACAACAACTTCCTGTACTTTCGCGCCGGGGCCGACGGCAATACCTTCGACCGGCACGACCTAAGCAAGTTGGCACCGCAGATCGTGGGGTACGCGGCGTTGGCCATTCAGGGCACGAAGTTCGGCGAACCGCGCATGCAGAGCGTCAAAAGCTACGGGCGCTTCCCCACATTGCCCATTAGCACCGATGTGCGTTTCGACATCCGCAATTTGAAAGGCACGTTCGTCGTCGATGCGCTTGGGGTGAACGTGCCTTCGTCGTGGGAGGTGCGCTTGATTGATACACACAAAACCACGACAACCACCGACGACGATACCACCAAGATCGACCCACCGTCGGAAGGCTATCGCTTCACCATAAGCACGAAACGCATCCCAACGCCTGGCCCCGCGCCGATGATCGTGGCCCAGGACAGCGCAGATGCGGGCGTGCAGCCTCGTTTCAAGCTCCTAATAGACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
0a3110dba86d8f26e1feaa271bc29f2d928bfbb346631f199f8a843234319b6d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6762
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Snapshot of virus evolution in hypersaline environments from the characterization of a membrane-containing Salisaeta icosahedral phage 1 Aalto,A.P., Bitto,D., Ravantti,J.J., Bamford,D.H., Huiskonen,J.T. and Oksanen,H.M. 2012 22509017 GenBank