Protein

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Genbank accession
WPH60324.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MAYATENYGSTRAELIAALKNRFEAAGYEVAGHDGEYLCVKLAADLFIEYRCTYFMYVTRSGRQRYTNAIHWEMGTSHNGARVAGTRSPDEGQGTNYSGWSGPVQHVPLPGKLHFCKTDVAGKNDFIFCVENPADGKGASFLGAELACVDAQFGAHSHFYLAGHCADSGRDDSTNSGPFHHTNSYNGCGFIRRQNADGSFHTYETAGYGPNSTSADYNTINSFLSTGTSGFYDGIDTGLYFSPSLTTILLPAIWGCVQPKQSSPSPGRYGAPPKGDFPQFKICSMSYAGIGEQLTLDGKTYRLFPRIGKGGSNTAGFAIRES
Physico‐chemical
properties
protein length:322 AA
molecular weight: 34773,05930 Da
isoelectric point:6,40265
aromaticity:0,12733
hydropathy:-0,40994

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WPH60324.1
1 322
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0040
Central domain 11 209 200 0,0043
C-terminal 210 322 112 0,9984
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-322

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_VpaS_SD15
[NCBI] 		3092583 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WPH60324.1 [NCBI]
Genbank nucleotide accession
OR662133 [NCBI]
CDS location
range 28127 -> 29095
strand +
CDS
ATGGCTTACGCTACTGAGAACTACGGGTCTACGAGGGCAGAACTCATAGCCGCACTCAAGAATCGCTTTGAGGCAGCTGGCTATGAGGTAGCTGGTCATGATGGCGAGTACCTGTGTGTAAAGCTCGCGGCTGACCTGTTCATTGAGTATCGCTGCACGTACTTCATGTACGTCACTAGATCAGGTCGTCAGCGATACACTAACGCGATCCATTGGGAGATGGGCACTTCACATAACGGTGCACGTGTGGCTGGCACTAGAAGCCCTGATGAGGGGCAGGGAACAAACTATTCTGGGTGGTCAGGTCCAGTCCAGCATGTCCCGCTACCGGGAAAACTACACTTCTGCAAGACGGATGTTGCTGGTAAGAACGATTTCATATTCTGCGTTGAAAATCCAGCAGACGGAAAGGGAGCCTCCTTCCTTGGGGCAGAGTTAGCCTGCGTAGACGCACAGTTCGGGGCACACAGTCACTTCTACTTAGCGGGGCACTGTGCTGACAGTGGTAGGGATGACAGCACTAACTCTGGACCATTCCACCACACTAACTCGTATAATGGCTGCGGCTTTATACGGCGTCAGAACGCGGACGGGTCGTTCCATACATATGAGACTGCTGGTTACGGTCCTAACAGCACCTCCGCAGACTACAATACGATCAATAGCTTCCTGTCCACGGGCACGTCTGGGTTTTACGACGGTATTGATACGGGTCTGTATTTCTCCCCGTCGCTGACCACGATCCTTCTCCCGGCTATATGGGGGTGTGTGCAGCCAAAGCAGTCTTCCCCATCACCCGGTAGGTATGGAGCACCGCCAAAAGGTGACTTCCCGCAGTTCAAGATCTGTTCGATGTCCTACGCGGGAATAGGAGAACAACTTACTCTTGATGGGAAGACCTACAGGCTGTTTCCAAGGATCGGGAAGGGTGGTAGTAACACTGCTGGCTTTGCAATAAGGGAGAGTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
fa5d0a0a42827f1908712845d9f84c726a724ebee87e07f8868f9e31289b39ba
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6523
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Analysis of Vibrio parahaemolyticus phage genome Wang,Z., Chen,D. and Li,Y. 2021-04-02 — GenBank